Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20e05
(697 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 4.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 6.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 6.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 6.4
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 6.4
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 380 YGINFNGISRFSYSKIVYEKTHI 312
Y N+N ++ +Y+K+ Y +I
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINYI 349
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 240 NSIKLGLTVIILFLHSIIP 296
+SI L LTV L L IIP
Sbjct: 285 SSILLSLTVFFLLLAEIIP 303
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.4
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -2
Query: 117 CYWNVFLSYQ 88
CYW ++++YQ
Sbjct: 486 CYWVIYVTYQ 495
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 97 IVSNIS*RYCKYKFIQYDN*YTNKY 23
I+S++S Y + Y+N Y N Y
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 97 IVSNIS*RYCKYKFIQYDN*YTNKY 23
I+S++S Y + Y+N Y N Y
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNY 105
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 243 SIKLGLTVIILFLHSIIP 296
SI L LTV L L IIP
Sbjct: 277 SILLSLTVFFLLLAEIIP 294
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 243 SIKLGLTVIILFLHSIIP 296
SI L LTV L L IIP
Sbjct: 273 SILLSLTVFFLLLAEIIP 290
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,394
Number of Sequences: 438
Number of extensions: 4660
Number of successful extensions: 28
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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