Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20e02
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051823-1|AAK93247.1|  439|Drosophila melanogaster LD33178p pro...    31   1.7  
AE014297-2018|AAF55177.2|  439|Drosophila melanogaster CG31301-P...    31   1.7  
U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   6.9  
U02296-1|AAD10615.1|  581|Drosophila melanogaster cocaine-sensit...    29   6.9  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   6.9  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   6.9  
AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-P...    28   9.1  

>AY051823-1|AAK93247.1|  439|Drosophila melanogaster LD33178p
           protein.
          Length = 439

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 296 PYSSESGYPAGSSHVNRPCFGQCNPPKLYAD 388
           P  S S  P  SSH+ R CFG  +P  LY D
Sbjct: 132 PLPSTSS-PEDSSHIKRQCFGGGDPVDLYQD 161


>AE014297-2018|AAF55177.2|  439|Drosophila melanogaster CG31301-PA
           protein.
          Length = 439

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 296 PYSSESGYPAGSSHVNRPCFGQCNPPKLYAD 388
           P  S S  P  SSH+ R CFG  +P  LY D
Sbjct: 132 PLPSTSS-PEDSSHIKRQCFGGGDPVDLYQD 161


>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 627 LLPITMLIISGPIPIFAGLFTLGMF----CVKLFNGVCPDCNG 511
           L+P  + +I G +P+F     LG F    C+ ++  +CP   G
Sbjct: 113 LVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKG 155


>U02296-1|AAD10615.1|  581|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 581

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 627 LLPITMLIISGPIPIFAGLFTLGMF----CVKLFNGVCPDCNG 511
           L+P  + +I G +P+F     LG F    C+ ++  +CP   G
Sbjct: 72  LVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKG 114


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 627 LLPITMLIISGPIPIFAGLFTLGMF----CVKLFNGVCPDCNG 511
           L+P  + +I G +P+F     LG F    C+ ++  +CP   G
Sbjct: 113 LVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKG 155


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 627 LLPITMLIISGPIPIFAGLFTLGMF----CVKLFNGVCPDCNG 511
           L+P  + +I G +P+F     LG F    C+ ++  +CP   G
Sbjct: 113 LVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWKRICPALKG 155


>AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-PA
            protein.
          Length = 2977

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +2

Query: 407  EKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLTQNI 559
            ++  Q +   V   L TI PAN V  N  +S       SG T   N+ QNI
Sbjct: 1883 QQQQQQLQSTVPEPLKTIVPANVVQPNNHSSTPAGAATSGATTAANIQQNI 1933


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,367,517
Number of Sequences: 53049
Number of extensions: 494059
Number of successful extensions: 1536
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)