Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d23
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.8  
AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    24   4.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.4  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   7.1  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   9.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = +3

Query: 477 NINEYEKQLQRYQHTLNIAQTEKKNAIRKQMLTKAFKLKLLEVENQCNIE 626
           NINEY++QL+ +   L+     K + I ++M  +  K++ ++ E+  N+E
Sbjct: 738 NINEYDRQLEDFTRELD-QIGPKISEIERRMQQRDMKIQDIK-ESMNNVE 785


>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 TFSLTSNNQELDDLELSKSIYSTCID 455
           T SLT+  + LDD+EL  ++   C+D
Sbjct: 108 THSLTALGERLDDVELD-NVMKDCMD 132


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 381 MWDCYWKWIQNEQ 343
           +WDC W W++ ++
Sbjct: 787 VWDCCWVWLKFQE 799


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 15/58 (25%), Positives = 23/58 (39%)
 Frame = +3

Query: 348 HFESISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNKMNYGVNINEYEKQLQRYQHT 521
           H E  S N  TFS         D  ++  +YST   + +N+   I +    +    HT
Sbjct: 104 HMECCSGNCLTFSYKCVPLSPSDSAMTGPLYSTPQISMVNFTNRIGDETSSILTTTHT 161


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 144 LDEKYHDNKMNAKDHNNECGNDVTPQLIDDSEVKLKERI 260
           L+   H     AK H + C        + DS+VK +++I
Sbjct: 832 LEPPKHHASRGAKPHRSRCEATEARSHLADSQVKKEQQI 870


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,230
Number of Sequences: 2352
Number of extensions: 9590
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)