Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d23
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047044-1|AAH47044.1|  347|Homo sapiens USP47 protein protein.        32   2.3  
BC017795-1|AAH17795.1|  331|Homo sapiens Unknown (protein for IM...    32   2.3  
AK074076-1|BAB84902.1|  772|Homo sapiens FLJ00147 protein protein.     32   2.3  
AK027362-1|BAB55063.1| 1287|Homo sapiens protein ( Homo sapiens ...    32   2.3  
AK000734-1|BAA91348.1|  347|Homo sapiens protein ( Homo sapiens ...    31   3.0  

>BC047044-1|AAH47044.1|  347|Homo sapiens USP47 protein protein.
          Length = 347

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
 Frame = +3

Query: 360 ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK--MNYGVNINEYEKQLQRYQHTLNIA 533
           +S++   F + ++NQE + + L++++ S   DNK  +  G  + + E +++ YQ  +N  
Sbjct: 48  LSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQ 107

Query: 534 QTEK---KNAIRKQMLTKAFKLKLL-EVENQCNIEL 629
           +  K        K M  +  K +L+ ++  QC +EL
Sbjct: 108 EPCKFLLDAVFAKGMTVRQSKEELIPQLREQCGLEL 143


>BC017795-1|AAH17795.1|  331|Homo sapiens Unknown (protein for
           IMAGE:4672711) protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
 Frame = +3

Query: 360 ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK--MNYGVNINEYEKQLQRYQHTLNIA 533
           +S++   F + ++NQE + + L++++ S   DNK  +  G  + + E +++ YQ  +N  
Sbjct: 67  LSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQ 126

Query: 534 QTEK---KNAIRKQMLTKAFKLKLL-EVENQCNIEL 629
           +  K        K M  +  K +L+ ++  QC +EL
Sbjct: 127 EPCKFLLDAVFAKGMTVRQSKEELIPQLREQCGLEL 162


>AK074076-1|BAB84902.1|  772|Homo sapiens FLJ00147 protein protein.
          Length = 772

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
 Frame = +3

Query: 360 ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK--MNYGVNINEYEKQLQRYQHTLNIA 533
           +S++   F + ++NQE + + L++++ S   DNK  +  G  + + E +++ YQ  +N  
Sbjct: 473 LSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQ 532

Query: 534 QTEK---KNAIRKQMLTKAFKLKLL-EVENQCNIEL 629
           +  K        K M  +  K +L+ ++  QC +EL
Sbjct: 533 EPCKFLLDAVFAKGMTVRQSKEELIPQLREQCGLEL 568


>AK027362-1|BAB55063.1| 1287|Homo sapiens protein ( Homo sapiens cDNA
            FLJ14456 fis, clone HEMBB1001915, moderately similar to
            UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 64E (EC 3.1.2.15).
            ).
          Length = 1287

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
 Frame = +3

Query: 360  ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK--MNYGVNINEYEKQLQRYQHTLNIA 533
            +S++   F + ++NQE + + L++++ S   DNK  +  G  + + E +++ YQ  +N  
Sbjct: 988  LSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQ 1047

Query: 534  QTEK---KNAIRKQMLTKAFKLKLL-EVENQCNIEL 629
            +  K        K M  +  K +L+ ++  QC +EL
Sbjct: 1048 EPCKFLLDAVFAKGMTVRQSKEELIPQLREQCGLEL 1083


>AK000734-1|BAA91348.1|  347|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20727 fis, clone HEP13238. ).
          Length = 347

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
 Frame = +3

Query: 360 ISNNSPTFSLTSNNQELDDLELSKSIYSTCIDNK--MNYGVNINEYEKQLQRYQHTLNIA 533
           +S++   F + ++NQE + + L++++ S   DNK  +  G  + + E +++ YQ  +N  
Sbjct: 48  LSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQ 107

Query: 534 QTEK---KNAIRKQMLTKAFKLKLL-EVENQCNIEL 629
           +  K        K M  +  K +L+ ++  QC +EL
Sbjct: 108 EPCKFLLDAVFAKGMTVRQSKGELIPQLREQCGLEL 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,653,475
Number of Sequences: 237096
Number of extensions: 1169457
Number of successful extensions: 4884
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4884
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)