Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d21
         (567 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0220 + 28482589-28483752                                         31   0.48 
01_06_0049 - 25953811-25954131,25954223-25954903                       30   1.1  

>05_07_0220 + 28482589-28483752
          Length = 387

 Score = 31.5 bits (68), Expect = 0.48
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 514 YKTELCRPFEEAGVCKYG 567
           +KTELC  +EE G C YG
Sbjct: 313 FKTELCNKWEETGACPYG 330



 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 514 YKTELCRPFEEAGVCKYG 567
           YKT++CR     GVC YG
Sbjct: 351 YKTQVCRMVLAGGVCPYG 368


>01_06_0049 - 25953811-25954131,25954223-25954903
          Length = 333

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 514 YKTELCRPFEEAGVCKYG 567
           +KTELC  +EE G C YG
Sbjct: 259 FKTELCNKWEETGDCPYG 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,486,437
Number of Sequences: 37544
Number of extensions: 264944
Number of successful extensions: 668
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)