Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d21
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL117204-10|CAB55125.1| 196|Caenorhabditis elegans Hypothetical... 29 2.3
AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical ... 29 2.3
Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical... 29 3.1
AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical ... 29 3.1
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 28 5.4
U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior segr... 28 5.4
AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic z... 28 5.4
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 27 7.1
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 27 7.1
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 27 7.1
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical p... 27 9.4
Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical p... 27 9.4
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKTE C+ F ++G C YG
Sbjct: 196 YKTEACQSFHQSGYCPYG 213
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKTELCR + + G C YG
Sbjct: 158 YKTELCRSWMDHGRCNYG 175
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKTE C+ F ++G C YG
Sbjct: 237 YKTEACQSFHQSGYCPYG 254
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKTELCR + + G C YG
Sbjct: 199 YKTELCRSWMDHGRCNYG 216
>AL117204-10|CAB55125.1| 196|Caenorhabditis elegans Hypothetical
protein Y116A8C.19 protein.
Length = 196
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 125 YKTVLCDKFSTTGYCKYG 142
>AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical
protein Y60A9.3 protein.
Length = 203
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 130 YKTVLCNKFSTTGHCKYG 147
>Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical
protein F38C2.7 protein.
Length = 203
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 130 YKTVLCNNFSTTGHCKYG 147
>Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical
protein C35D6.4 protein.
Length = 203
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 130 YKTVLCNNFSTTGHCKYG 147
>AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical
protein Y116A8C.20 protein.
Length = 201
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 130 YKTVLCDKFTTTGYCKYG 147
>AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical
protein Y116A8C.17 protein.
Length = 205
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 134 YKTVLCDKFTTTGYCKYG 151
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 116 YKTVLCDNFSRTGHCKYG 133
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 112 YKTVLCDNFSTTGHCKYG 129
>U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior
segregation protein 1 protein.
Length = 264
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 142 YKTVLCDKFSMTGNCKYG 159
>AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic
zinc-finger protein protein.
Length = 264
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT LC F G CKYG
Sbjct: 142 YKTVLCDKFSMTGNCKYG 159
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT+LC F G C YG
Sbjct: 182 YKTQLCDKFSNFGQCPYG 199
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT+LC F G C YG
Sbjct: 182 YKTQLCDKFSNFGQCPYG 199
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT+LC F G C YG
Sbjct: 182 YKTQLCDKFSNFGQCPYG 199
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT+LC + G+C YG
Sbjct: 173 YKTKLCDKYTTTGLCPYG 190
>Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT+LC + G+C YG
Sbjct: 155 YKTKLCDKYTTTGLCPYG 172
>Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 514 YKTELCRPFEEAGVCKYG 567
YKT+LC + G+C YG
Sbjct: 155 YKTKLCDKYTTTGLCPYG 172
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 14 TSSKVFVNFSSANLKFTVSSSTLYIRATVDQFPKKHQEI 130
TS++V V NLKF +ST+ + T DQFP+ +
Sbjct: 314 TSTRVKVKVG--NLKFHPHTSTITHQPTADQFPESPDSV 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,395,510
Number of Sequences: 27780
Number of extensions: 235333
Number of successful extensions: 617
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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