Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d18
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81900-1|CAA57489.1| 70|Homo sapiens NADH oxidoreductase subun... 39 0.006
U54993-1|AAD00084.1| 70|Homo sapiens mitochondrial complex I h... 39 0.006
CR456889-1|CAG33170.1| 70|Homo sapiens ZNF183 protein. 39 0.006
BC000266-1|AAH00266.1| 70|Homo sapiens NADH dehydrogenase (ubi... 39 0.006
BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein. 30 2.0
AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein pr... 30 2.0
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 30 2.0
AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens ... 29 6.2
L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kina... 28 8.2
>X81900-1|CAA57489.1| 70|Homo sapiens NADH oxidoreductase subunit
MWFE protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 100 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 273
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 274 YEVNGLEAI 300
Y GLE I
Sbjct: 61 YVSKGLENI 69
>U54993-1|AAD00084.1| 70|Homo sapiens mitochondrial complex I
hMWFE subunit protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 100 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 273
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 274 YEVNGLEAI 300
Y GLE I
Sbjct: 61 YVSKGLENI 69
>CR456889-1|CAG33170.1| 70|Homo sapiens ZNF183 protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 100 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 273
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 274 YEVNGLEAI 300
Y GLE I
Sbjct: 61 YVSKGLENI 69
>BC000266-1|AAH00266.1| 70|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 1, 7.5kDa protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 100 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 273
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 274 YEVNGLEAI 300
Y GLE I
Sbjct: 61 YVSKGLENI 69
>BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein.
Length = 954
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 313 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 233
+++PG PSHSL +D++ + GTTH
Sbjct: 913 YSFPGERPSHSLSRDFKNQTTLLGTTH 939
>AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 313 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 233
+++PG PSHSL +D++ + GTTH
Sbjct: 804 YSFPGERPSHSLSRDFKNQTTLLGTTH 830
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 313 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 233
+++PG PSHSL +D++ + GTTH
Sbjct: 898 YSFPGERPSHSLSRDFKNQTTLLGTTH 924
>AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens
cDNA FLJ16772 fis, clone BRAWH3043827, highly similar
to Homo sapiens activated p21cdc42Hs kinase (ACK1). ).
Length = 1086
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 315 TSIIRDSFQAIHFIRITSKPHIPLVQRTTPSISKRASIMIA*KII-MTPPQSPTR 154
T R S + I +P +P ++ PS+++ A M A ++ TPPQSPTR
Sbjct: 636 TKASRGSGAEVTLIDFGEEPVVPALRPCAPSLAQLA--MDACSLLDETPPQSPTR 688
>L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kinase
protein.
Length = 1036
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 315 TSIIRDSFQAIHFIRITSKPHIPLVQRTTPSISKRASIMIA*KII-MTPPQSPTR 154
T R S + I +P +P ++ PS+++ A M A ++ TPPQSPTR
Sbjct: 558 TKASRGSGAEVTLIDFGEEPVVPALRPCPPSLAQLA--MDACSLLDETPPQSPTR 610
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,658,489
Number of Sequences: 237096
Number of extensions: 895653
Number of successful extensions: 1307
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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