Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d16
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.56 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 121 FHDFRICCPGXQRRRHPYFVHFFYNYFKIMY 29
           F ++ +       RR+P+FV F+ ++F+  Y
Sbjct: 408 FEEYFLNLTVENNRRNPWFVEFWEHHFQCRY 438


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 103 CCPGXQRRRH 74
           CCPG  RRR+
Sbjct: 408 CCPGRVRRRY 417


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 325 SVRPRRDTLRRHTSRTPFRPGCAAPRSL 242
           ++RP  +++ R +S +PF      P  +
Sbjct: 551 TLRPGSNSIERQSSESPFTTSTIMPSDI 578


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 325 SVRPRRDTLRRHTSRTPFRPGCAAPRSL 242
           ++RP  +++ R +S +PF      P  +
Sbjct: 551 TLRPGSNSIERQSSESPFTTSTIMPSDI 578


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 97  DNRCENHENIEICEQDNRVF 156
           D   +  EN+ + E DN+V+
Sbjct: 234 DKMSDQQENLTLKEVDNKVY 253


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 202 KCSSVDLEKQLLELETEVRHIQ 267
           K    D+E ++L+ + E  H+Q
Sbjct: 156 KLHGTDIEMRILKTKNECDHVQ 177


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 202 KCSSVDLEKQLLELETEVRHIQ 267
           K    D+E ++L+ + E  H+Q
Sbjct: 156 KLHGTDIEMRILKTKNECDHVQ 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,984
Number of Sequences: 438
Number of extensions: 1383
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)