Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d14
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.2  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   6.2  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   6.2  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 177 PPRPSKCGCPPKPGSGKVIVPPADCKP 257
           PP P   G PP P +G  +  PA  +P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRP 611


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 361 AIQSFNALGHEPPPKGPCRDYEYMRVRTKRF 453
           A+QS N +   PPPK   R       RT++F
Sbjct: 57  AVQSKNRMPPVPPPKHSQRRRRSSSPRTRQF 87


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 111 INKFKRP--LIWTVEKARRYSLCGPPRPSKCGCPPKP 215
           + +FK P  L W  ++ R    C     S+CGCP  P
Sbjct: 317 VKEFKCPDGLYWNDQQKR----CDSYSSSQCGCPDIP 349


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,441
Number of Sequences: 2352
Number of extensions: 14798
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)