Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d14
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66875-1|AAC51328.1| 97|Homo sapiens cytochrome oxidase subuni... 68 2e-11
BC029818-1|AAH29818.1| 97|Homo sapiens cytochrome c oxidase su... 68 2e-11
M83308-1|AAA52062.1| 97|Homo sapiens cytochrome c oxidase subu... 66 1e-10
AF020589-1|AAC98895.1| 86|Homo sapiens cytochrome C oxidase su... 63 7e-10
X15341-1|CAA33392.1| 86|Homo sapiens protein ( Human COX VIa-L... 58 3e-08
U83702-1|AAD00554.1| 86|Homo sapiens cytochrome c oxidase subu... 58 3e-08
BC107861-1|AAI07862.1| 109|Homo sapiens cytochrome c oxidase su... 58 3e-08
BC070186-1|AAH70186.1| 109|Homo sapiens cytochrome c oxidase su... 58 3e-08
BC007723-1|AAH07723.1| 109|Homo sapiens cytochrome c oxidase su... 58 3e-08
AL160264-2|CAI20472.1| 109|Homo sapiens protein ( Human DNA seq... 58 3e-08
AL021546-1|CAA16494.1| 109|Homo sapiens cytochrome c oxidase su... 58 3e-08
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 34 0.37
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 33 0.65
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 33 1.1
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 33 1.1
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 31 2.6
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 31 2.6
AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens ... 31 4.6
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 30 6.1
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 30 6.1
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 30 6.1
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 30 6.1
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 30 6.1
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 30 6.1
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 30 6.1
AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase... 30 8.0
>U66875-1|AAC51328.1| 97|Homo sapiens cytochrome oxidase subunit
VIa heart isoform precursor protein.
Length = 97
Score = 68.1 bits (159), Expect = 2e-11
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDGVKSFYH 486
+ +R T+ + LP +A+ +FN+ GH P P+ R Y+++R+RTK +PWGDG + +H
Sbjct: 26 RTWRLLTFVLALPSVALCTFNSYLHSGHRPRPE--FRPYQHLRIRTKPYPWGDGNHTLFH 83
Query: 487 NEHVNHLPGECEAP 528
N HVN LP E P
Sbjct: 84 NSHVNPLPTGYEHP 97
>BC029818-1|AAH29818.1| 97|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 2 protein.
Length = 97
Score = 68.1 bits (159), Expect = 2e-11
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDGVKSFYH 486
+ +R T+ + LP +A+ +FN+ GH P P+ R Y+++R+RTK +PWGDG + +H
Sbjct: 26 RTWRLLTFVLALPSVALCTFNSYLHSGHRPRPE--FRPYQHLRIRTKPYPWGDGNHTLFH 83
Query: 487 NEHVNHLPGECEAP 528
N HVN LP E P
Sbjct: 84 NSHVNPLPTGYEHP 97
>M83308-1|AAA52062.1| 97|Homo sapiens cytochrome c oxidase subunit
VIa protein.
Length = 97
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNALGHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYHNE 492
+ +R T+ + LP +A+ +FN+ H + P R Y+++R+RTK +PWGDG + +HN
Sbjct: 26 RTWRLLTFVLALPSVALCTFNSYLHSGHRERPEFRPYQHLRIRTKPYPWGDGNHTLFHNS 85
Query: 493 HVNHLPGECEAP 528
HVN LP E P
Sbjct: 86 HVNPLPTGYEHP 97
>AF020589-1|AAC98895.1| 86|Homo sapiens cytochrome C oxidase
subunit VIa homolog protein.
Length = 86
Score = 63.3 bits (147), Expect = 7e-10
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL---GHEPPPKGPCRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ TYFV LP + + N HE + P Y ++R+RTK FPWGDG + +H
Sbjct: 13 RMWKALTYFVALPGVGVSMLNVFLKSRHEEHERPPFVAYPHLRIRTKPFPWGDGNHTLFH 72
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 73 NPHVNPLP 80
>X15341-1|CAA33392.1| 86|Homo sapiens protein ( Human COX VIa-L
mRNA for cytochrome c oxidase liver-specific subunitVIa
(EC 1.9.3.1). ).
Length = 86
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 13 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 72
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 73 NPHVNPLP 80
>U83702-1|AAD00554.1| 86|Homo sapiens cytochrome c oxidase subunit
VIa protein.
Length = 86
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 13 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 72
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 73 NPHVNPLP 80
>BC107861-1|AAI07862.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 36 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 95
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 96 NPHVNPLP 103
>BC070186-1|AAH70186.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 36 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 95
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 96 NPHVNPLP 103
>BC007723-1|AAH07723.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 36 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 95
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 96 NPHVNPLP 103
>AL160264-2|CAI20472.1| 109|Homo sapiens protein ( Human DNA
sequence from clone RP3-405J24 on chromosome 6 Contains
the FDG2 gene for FGD1 family member 2, the gene for a
novel protein ).
Length = 109
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 36 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 95
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 96 NPHVNPLP 103
>AL021546-1|CAA16494.1| 109|Homo sapiens cytochrome c oxidase
subunit VIa polypeptide 1 protein.
Length = 109
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 316 KKYRNFTYFVLLPLIAIQSFNAL--GHEPPPKGP-CRDYEYMRVRTKRFPWGDGVKSFYH 486
+ ++ T+FV LP +A+ N H + P Y ++R+RTK FPWGDG + +H
Sbjct: 36 RMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFH 95
Query: 487 NEHVNHLP 510
N HVN LP
Sbjct: 96 NPHVNPLP 103
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 34.3 bits (75), Expect = 0.37
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 177 PPRPSKCGCPPKPGSGKVIVPPADCKPGP 263
PP P+ GCPP P PP +PGP
Sbjct: 19 PPPPAPFGCPPPPLPSPAFPPPLPQRPGP 47
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 33.5 bits (73), Expect = 0.65
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG G +PP+D C+PGP
Sbjct: 336 SIPGPPGLDGQPGAPGLPGPPGPGSPHIPPSDEICEPGP 374
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 159 RYSLCGPPRPSKC--GCPPKPGSGKVIVPPADCKPGPICY-NPCVP 287
RY LCGP P+ C P SG+ V C PG + CVP
Sbjct: 750 RYELCGPACPTSCNGAAAPSNCSGRPCVEGCVCLPGFVASGGACVP 795
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 159 RYSLCGPPRPSKC--GCPPKPGSGKVIVPPADCKPGPICY-NPCVP 287
RY LCGP P+ C P SG+ V C PG + CVP
Sbjct: 750 RYELCGPACPTSCNGAAAPSNCSGRPCVEGCVCLPGFVASGGACVP 795
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 138 WTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 287
W V+ S C PP + C P P S ++ P C P C C P
Sbjct: 17 WQVDDCPE-SCCEPPCSAPSCCAPAP-SLSLVCTPVSCVSSPCCQAACEP 64
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 138 WTVEKARRYSLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVP 287
W V+ S C PP + C P P S ++ P C P C C P
Sbjct: 17 WQVDDCPE-SCCEPPCSAPSCCAPAP-SLSLVCTPVSCVSSPCCQAACEP 64
>AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ46186 fis, clone TESTI4005013. ).
Length = 652
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 165 SLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCV 284
SL P+ + G PKP PP C GP C P +
Sbjct: 323 SLVNTPQHTPSG-QPKPAKAHTCPPPPSCLSGPSCMQPYI 361
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5
chain protein.
Length = 1691
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 25 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 63
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 165 SLCGPP----RPSKCGCPPKPGSGKVIVPPAD--CKPGP 263
S+ GPP +P G P PG +PP+D C+PGP
Sbjct: 417 SIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGP 455
>AB209155-1|BAD92392.1| 699|Homo sapiens serine/threonine kinase 23
variant protein.
Length = 699
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 204 PPKPGSGKVIVPPADCKPGPICYNPCVPRFHHGK 305
PP P S K+ + P D +P + PC R H K
Sbjct: 2 PPNPISPKLHIKPTDTRPLVLALEPCGSRGQHVK 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,613,750
Number of Sequences: 237096
Number of extensions: 2321676
Number of successful extensions: 6993
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6879
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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