Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d13
(537 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p... 32 1.5
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein. 32 1.5
AF104918-1|AAD17932.1| 1010|Homo sapiens myeloid/lymphoid leukem... 32 1.5
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein. 32 1.5
AK126659-1|BAC86632.1| 248|Homo sapiens protein ( Homo sapiens ... 31 2.0
AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein. 31 3.4
AJ289417-1|CAB93299.1| 112|Homo sapiens immunoglobulin heavy ch... 30 4.5
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 30 6.0
AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein. 30 6.0
BC036337-1|AAH36337.1| 811|Homo sapiens KIAA0644 gene product p... 29 7.9
AB014544-1|BAA31619.2| 887|Homo sapiens KIAA0644 protein protein. 29 7.9
>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
protein.
Length = 2715
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -3
Query: 526 VQEPEPLGRHRVPQRAREPYCDPDLGEPEHQVVPVAGHHRHLSLPEFA 383
V P PLG P+ P D EPE + V G HLSLP FA
Sbjct: 665 VLTPPPLGAPEAPE-PEPPPADDSPAEPEPRAV---GRTNHLSLPRFA 708
>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
Length = 2605
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -3
Query: 526 VQEPEPLGRHRVPQRAREPYCDPDLGEPEHQVVPVAGHHRHLSLPEFA 383
V P PLG P+ P D EPE + V G HLSLP FA
Sbjct: 555 VLTPPPLGAPEAPE-PEPPPADDSPAEPEPRAV---GRTNHLSLPRFA 598
>AF104918-1|AAD17932.1| 1010|Homo sapiens myeloid/lymphoid leukemia
2 protein.
Length = 1010
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -3
Query: 526 VQEPEPLGRHRVPQRAREPYCDPDLGEPEHQVVPVAGHHRHLSLPEFA 383
V P PLG P+ P D EPE + V G HLSLP FA
Sbjct: 3 VLTPPPLGAPEAPE-PEPPPADDSPAEPEPRAV---GRTNHLSLPRFA 46
>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
Length = 2415
Score = 31.9 bits (69), Expect = 1.5
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -3
Query: 526 VQEPEPLGRHRVPQRAREPYCDPDLGEPEHQVVPVAGHHRHLSLPEFA 383
V P PLG P+ P D EPE + V G HLSLP FA
Sbjct: 365 VLTPPPLGAPEAPE-PEPPPADDSPAEPEPRAV---GRTNHLSLPRFA 408
>AK126659-1|BAC86632.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ44703 fis, clone BRACE3016788. ).
Length = 248
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 396 RLRCRWCPATGTTWCSGSPRSGSQYGSRARCGTRWRPSG 512
R RC+ ATG W GSP+S +++G+R R G R SG
Sbjct: 129 RKRCK--AATG--WVRGSPKSRTEWGARDRAGQRPGLSG 163
>AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein.
Length = 1014
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 411 WCPATGTTWCSGSPRSGSQYGSRARCGTRWRPSGSG 518
W A+ + W PR+G + GSR R RWR +G G
Sbjct: 15 WRRASFSAW----PRAGGRRGSRRRQWGRWRAAGGG 46
>AJ289417-1|CAB93299.1| 112|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 112
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 277 VHRSVSVQQIRLNSLFSDKRILGFISVG*GSGTGRYYGAYFG 152
V RS+S ++LNSL + + + + GSG +YY Y+G
Sbjct: 63 VDRSISTAYLQLNSLKASDTAMYYCARQGGSGWSKYYFDYWG 104
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 PLAAAPVARGPDQPRADAHTDRLLP-GF*NPKRILED*GAGGVPQLARPGVPARRDRGRS 468
P A +P RGP P + A D P P +LE GAGG P A P PA GRS
Sbjct: 640 PQAISP--RGPTSPASPAALDISEPLAVSVPPAVLELLGAGGAPASATP-TPA-LSPGRS 695
Query: 469 MVP 477
+ P
Sbjct: 696 LRP 698
>AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein.
Length = 903
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 PLAAAPVARGPDQPRADAHTDRLLP-GF*NPKRILED*GAGGVPQLARPGVPARRDRGRS 468
P A +P RGP P + A D P P +LE GAGG P A P PA GRS
Sbjct: 421 PQAISP--RGPTSPASPAALDISEPLAVSVPPAVLELLGAGGAPASATP-TPA-LSPGRS 476
Query: 469 MVP 477
+ P
Sbjct: 477 LRP 479
>BC036337-1|AAH36337.1| 811|Homo sapiens KIAA0644 gene product
protein.
Length = 811
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 517 PEPLGRHRVPQRAREPYCDPDLGEPEHQVVP 425
P+ L H+ PQR R DP L EP P
Sbjct: 506 PQSLDLHKKPQRGRPTRADPALAEPTPTASP 536
>AB014544-1|BAA31619.2| 887|Homo sapiens KIAA0644 protein protein.
Length = 887
Score = 29.5 bits (63), Expect = 7.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 517 PEPLGRHRVPQRAREPYCDPDLGEPEHQVVP 425
P+ L H+ PQR R DP L EP P
Sbjct: 582 PQSLDLHKKPQRGRPTRADPALAEPTPTASP 612
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,622,525
Number of Sequences: 237096
Number of extensions: 1818418
Number of successful extensions: 13970
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13970
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -