Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d12
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.64 
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    25   1.5  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   2.6  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   3.4  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    24   4.5  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   6.0  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   6.0  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +1

Query: 223 REELLKLDKNDLVEKIIQLQAHNTQLKNIINKTTPCDGQKQKKVDQR 363
           +EEL +  K D   + ++   + T+LK    +    DGQ++   D++
Sbjct: 207 KEELSEYQKWDKARRTLEYVIYETELKETRKQLEELDGQRKSSGDKQ 253



 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/53 (20%), Positives = 28/53 (52%)
 Frame = +1

Query: 223 REELLKLDKNDLVEKIIQLQAHNTQLKNIINKTTPCDGQKQKKVDQREFMFEK 381
           R++ ++ +   L ++I    +H  +L++ + K     G+ +KK+ +    FE+
Sbjct: 391 RDKWIQGELKSLNKQIKDKISHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQ 443


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 343 QKKVDQREFMFEKCHYRHVLLR 408
           +++++Q E  F+K HY  VLLR
Sbjct: 196 EEQLEQLEATFDKTHYPDVLLR 217


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
 Frame = -1

Query: 288 MGLQLYYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFHILTS------LILLFQAHVVYFN 127
           + ++++ F   +   +L +FL  C+PV +L  +QF  + +S      LI+     V+YFN
Sbjct: 11  VNVRVWLFWSYLRRPRLSRFLVGCIPVAVLNVFQFLKLYSSWGDMSELIINGYFTVLYFN 70

Query: 126 TTL 118
             L
Sbjct: 71  LVL 73


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 347 FCFWPSQGVVLFMMFFSCVLWACNCIIFSTRS 252
           FC   +   ++ M+   C LW  NC  F T S
Sbjct: 230 FCHTFAYYHIIAMLNGFCSLWFVNCTAFGTAS 261


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +1

Query: 421 GW--EYQGLAVQENTTQTVEYHLFEALKRACLIQSRETSNYHR 543
           GW  +Y+G ++   TT T   HL  +L    L      S++ R
Sbjct: 83  GWRLDYRGSSITTTTTSTCHSHLLPSLAITGLSIGSSNSSFLR 125


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 555 CTTTSVIIRGFT 520
           CT TS+I+ GFT
Sbjct: 298 CTNTSIIVDGFT 309


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +1

Query: 421 GW--EYQGLAVQENTTQTVEYHLFEAL 495
           GW  +Y+G ++   TT T   HL  +L
Sbjct: 83  GWRLDYRGSSITTTTTSTCHSHLLPSL 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,727
Number of Sequences: 2352
Number of extensions: 15358
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)