Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d12
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical pr...    73   2e-13
U00064-3|AAB52706.2|  375|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z70753-11|CAA94766.1|  244|Caenorhabditis elegans Hypothetical p...    28   6.2  
U00049-1|AAC47053.2|  288|Caenorhabditis elegans Serpentine rece...    27   8.2  
AC006618-2|AAK68249.1|  340|Caenorhabditis elegans Glutamine syn...    27   8.2  

>Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical
           protein E02H1.3 protein.
          Length = 402

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 36/89 (40%), Positives = 53/89 (59%)
 Frame = +1

Query: 340 KQKKVDQREFMFEKCHYRHVLLRVSYLGWEYQGLAVQENTTQTVEYHLFEALKRACLIQS 519
           K KK    +F+      R + ++  YLGWE+ GL  Q +T  TVE H+ +AL +  LI+ 
Sbjct: 15  KSKKAKTLDFLAHP--RRKIAIQFFYLGWEHDGLVQQPHTQNTVENHIMQALIKTHLIED 72

Query: 520 RETSNYHRCGRTDKGVSSFGQVISICLRS 606
               ++ RCGRTDKGVS+F Q  ++ +RS
Sbjct: 73  WTKCDFSRCGRTDKGVSAFKQTAAMVVRS 101


>U00064-3|AAB52706.2|  375|Caenorhabditis elegans Hypothetical
           protein ZC155.4 protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 229 ELLKLDKNDLVEKIIQLQAHNTQLKNIINKTTPCDGQKQKKVDQR 363
           ++  +D+N L + +IQ++ HN   K +++   P D  K K  D +
Sbjct: 220 DVKNVDENLLKQFVIQMKTHNLYSKVLVSGFNPIDTYKVKMADPK 264


>Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical
           protein F28C6.4a protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = -1

Query: 303 FQLCIMGLQL--YYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFHILTSLILL--FQAHV 139
           +Q  ++GLQL  Y F   I+F+      SC   +N LF ++   + TSLI L  FQ H+
Sbjct: 661 YQPILVGLQLMLYTFSGPILFLCGCNASSCTSLLNHLFSYRISSMCTSLICLYIFQNHL 719


>Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical
           protein C01G10.4 protein.
          Length = 72

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -1

Query: 189 QFFHILTSLILLFQAHVVYFNTTLYPRHS*YVHLNSHMYFNYEEEKNS 46
           +FF  + SL++L      Y+    YP ++ Y + N +  + Y    N+
Sbjct: 2   KFFSFIASLLVLLSTANAYYTYYYYPNNNNYNNNNGYTTYYYYPNNNN 49


>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
           protein C47A10.1 protein.
          Length = 1294

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 336 AIARCSFIYDVFQLCIMGLQLYYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFH 178
           A AR  F ++V Q C+  + L   +    F+Q   F+  C  ++  F  QFFH
Sbjct: 92  AAARAEFSHEVIQNCLKYVYLGCGIFAAGFLQASCFMVICEKLSNRFRRQFFH 144


>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
           protein C47A10.1 protein.
          Length = 1294

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 336 AIARCSFIYDVFQLCIMGLQLYYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFH 178
           A AR  F ++V Q C+  + L   +    F+Q   F+  C  ++  F  QFFH
Sbjct: 92  AAARAEFSHEVIQNCLKYVYLGCGIFAAGFLQASCFMVICEKLSNRFRRQFFH 144


>Z70753-11|CAA94766.1|  244|Caenorhabditis elegans Hypothetical
           protein F40F9.2 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
 Frame = -1

Query: 384 AFFKHKFSLVYFFLLLAIARC--SFIYDVFQLCIMGLQLYYFLDEIIFVQL*KFLSCCVP 211
           AF +  F LV     +  A C    + + FQ  +      YF+  I+F+ +   LSCC  
Sbjct: 30  AFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVAIALSCC-- 87

Query: 210 VNLLFWWQFFHILTSLILLFQAHVVYFNTTLY 115
            NL   +    IL ++  L  A +  F T  Y
Sbjct: 88  GNLRRQFPVNIILLTIFTLSAAVMTMFVTACY 119


>U00049-1|AAC47053.2|  288|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 1 protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = -1

Query: 348 FLLLAIARCSFIYDVFQLCIMGLQLYYFLDEIIFVQL*KFLSCCV-PVNL-LFWWQFF-H 178
           F+L  I + +   D++  C   LQ +  L +I+FV      SC + P++  LFW ++   
Sbjct: 93  FVLEHIKKLALFLDIYYPCFRYLQAFQILVQILFVA--NRASCVLWPLSYSLFWKKWLKS 150

Query: 177 ILTSLIL 157
           ILT++ +
Sbjct: 151 ILTTMAI 157


>AC006618-2|AAK68249.1|  340|Caenorhabditis elegans Glutamine
           synthetase (glutamate-ammonia ligase) protein 1 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 322 TPC-DGQKQKKVDQREFMFEKCHYRHVLLRVSYLGWEYQGLAVQENTTQTVE 474
           TPC DG   K +++      K H  H+     + G + +   +  N T+TV+
Sbjct: 268 TPCEDGTGWKAIEEAVVKLSKVHMHHIAYYDPHGGRDNERRLIGANQTETVD 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,230,843
Number of Sequences: 27780
Number of extensions: 345068
Number of successful extensions: 940
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)