Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d12
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.60
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 5.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 7.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 7.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.4
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 9.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 9.8
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 9.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.8
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.60
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 191 GSFSIS*RV*YYCFRHMSYILIQPYIPGIV 102
G FS+ +V + RH Y LIQ Y+P ++
Sbjct: 229 GEFSVL-QVSFNLQRHTGYFLIQVYVPCVL 257
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 12 PTYLPTFQRSVHCSSLLHN*NTYVNLSVHINY 107
P + + S + S+ +N N Y L +INY
Sbjct: 301 PKIISSLSNSCNYSNNYYNNNNYKKLYYNINY 332
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 149 RHMSYILIQPYIP 111
R SY LIQ YIP
Sbjct: 239 REFSYYLIQIYIP 251
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 149 RHMSYILIQPYIP 111
R SY LIQ YIP
Sbjct: 239 REFSYYLIQIYIP 251
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 149 RHMSYILIQPYIP 111
R M Y LIQ YIP
Sbjct: 218 RSMGYYLIQIYIP 230
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 231 FLSCCVPVNLLFWWQFFHI 175
F C V NL++W + HI
Sbjct: 412 FPVCFVCFNLMYWIIYLHI 430
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 149 RHMSYILIQPYIP 111
R M Y LIQ YIP
Sbjct: 218 RSMGYYLIQIYIP 230
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 231 FLSCCVPVNLLFWWQFFHI 175
F C V NL++W + HI
Sbjct: 412 FPVCFVCFNLMYWIIYLHI 430
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 2/15 (13%)
Frame = -2
Query: 320 VLFMMFFSCVL--WA 282
+LF+MFF C+ WA
Sbjct: 455 LLFLMFFECIAISWA 469
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 2/15 (13%)
Frame = -2
Query: 320 VLFMMFFSCVL--WA 282
+LF+MFF C+ WA
Sbjct: 508 LLFLMFFECIAISWA 522
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 149 RHMSYILIQPYIP 111
R M Y LIQ YIP
Sbjct: 157 RSMGYYLIQIYIP 169
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 508 LIQSRETSNYHRCGRT 555
L+++RET NY C T
Sbjct: 201 LVRARETPNYTACPPT 216
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 376 EKCHYRHVLL 405
+K HYRH+LL
Sbjct: 4 QKEHYRHILL 13
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 155 CFRHMSYILIQPYIP 111
CFR + +++PY+P
Sbjct: 272 CFRLLMNDILRPYVP 286
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 155 CFRHMSYILIQPYIP 111
CFR + +++PY+P
Sbjct: 187 CFRLLMNDILRPYVP 201
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 155 CFRHMSYILIQPYIP 111
CFR + +++PY+P
Sbjct: 506 CFRLLMNDILRPYVP 520
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,668
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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