Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d11
(644 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal... 31 3.5
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 31 3.5
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m... 31 3.5
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 31 3.5
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m... 31 3.5
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 31 3.5
BC033537-1|AAH33537.1| 419|Homo sapiens KIAA1576 protein protein. 30 6.1
AB046796-1|BAB13402.1| 448|Homo sapiens KIAA1576 protein protein. 30 6.1
L76571-1|AAC41998.1| 256|Homo sapiens nuclear hormone receptor ... 30 8.1
BC030207-1|AAH30207.1| 257|Homo sapiens nuclear receptor subfam... 30 8.1
AL356390-8|CAI13562.1| 257|Homo sapiens nuclear receptor subfam... 30 8.1
AB058644-1|BAB68530.1| 257|Homo sapiens small heterodimer partn... 30 8.1
>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 2896
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 563 VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 384
+A ++ F+ S S T E+ KV S+ QPDL T P+ R +R T++ +
Sbjct: 1350 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1408
Query: 383 SSFR 372
+FR
Sbjct: 1409 LAFR 1412
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 563 VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 384
+A ++ F+ S S T E+ KV S+ QPDL T P+ R +R T++ +
Sbjct: 1710 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1768
Query: 383 SSFR 372
+FR
Sbjct: 1769 LAFR 1772
>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 563 VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 384
+A ++ F+ S S T E+ KV S+ QPDL T P+ R +R T++ +
Sbjct: 1350 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1408
Query: 383 SSFR 372
+FR
Sbjct: 1409 LAFR 1412
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 563 VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 384
+A ++ F+ S S T E+ KV S+ QPDL T P+ R +R T++ +
Sbjct: 1710 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1768
Query: 383 SSFR 372
+FR
Sbjct: 1769 LAFR 1772
>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 563 VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 384
+A ++ F+ S S T E+ KV S+ QPDL T P+ R +R T++ +
Sbjct: 1350 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1408
Query: 383 SSFR 372
+FR
Sbjct: 1409 LAFR 1412
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 31.1 bits (67), Expect = 3.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 563 VANWLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLY 384
+A ++ F+ S S T E+ KV S+ QPDL T P+ R +R T++ +
Sbjct: 1710 LAGFIELFQTPSHTKESMTNEKTTKV-SYRASQPDLVDTPTSSKPQPKRSLRKADTEEEF 1768
Query: 383 SSFR 372
+FR
Sbjct: 1769 LAFR 1772
>BC033537-1|AAH33537.1| 419|Homo sapiens KIAA1576 protein protein.
Length = 419
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 323 FSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 418
F+K+ ++VEK+ + E+N +IAGFSL L+
Sbjct: 291 FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL 322
>AB046796-1|BAB13402.1| 448|Homo sapiens KIAA1576 protein protein.
Length = 448
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 323 FSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 418
F+K+ ++VEK+ + E+N +IAGFSL L+
Sbjct: 320 FAKSWWQVEKVNPIKLYEENKVIAGFSLLNLL 351
>L76571-1|AAC41998.1| 256|Homo sapiens nuclear hormone receptor
protein.
Length = 256
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 554 WLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKA 441
WL C L+SF+SL +P+ ++ +F PD+P +A
Sbjct: 147 WLQCC-LESFWSLELSPKEYACLKGTILFNPDVPGLQA 183
>BC030207-1|AAH30207.1| 257|Homo sapiens nuclear receptor subfamily
0, group B, member 2 protein.
Length = 257
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 554 WLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKA 441
WL C L+SF+SL +P+ ++ +F PD+P +A
Sbjct: 148 WLQCC-LESFWSLELSPKEYACLKGTILFNPDVPGLQA 184
>AL356390-8|CAI13562.1| 257|Homo sapiens nuclear receptor subfamily
0, group B, member 2 protein.
Length = 257
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 554 WLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKA 441
WL C L+SF+SL +P+ ++ +F PD+P +A
Sbjct: 148 WLQCC-LESFWSLELSPKEYACLKGTILFNPDVPGLQA 184
>AB058644-1|BAB68530.1| 257|Homo sapiens small heterodimer partner
protein.
Length = 257
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 554 WLVCFRLKSFFSLSSTPERAPKVRSFCIFQPDLPCTKA 441
WL C L+SF+SL +P+ ++ +F PD+P +A
Sbjct: 148 WLQCC-LESFWSLELSPKEYACLKGTILFNPDVPGLQA 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,924,059
Number of Sequences: 237096
Number of extensions: 1615141
Number of successful extensions: 6129
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6129
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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