Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d09
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open read... 30 7.3
AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open read... 30 7.3
AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein. 30 7.3
U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independe... 29 9.6
U41806-1|AAA93299.1| 440|Homo sapiens p60 protein. 29 9.6
BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein. 29 9.6
BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein. 29 9.6
BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein. 29 9.6
BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein. 29 9.6
BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome... 29 9.6
>BC065237-1|AAH65237.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 388 IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQ----SPPGNWP 221
+ SPEP P++ + PKP++ S+ P T G A++ + + P W
Sbjct: 202 VPSPEPQKPAPVSPESVKATLSNPKPQKQ---SHFPETLGPPSASSPESPVLAASPEPWG 258
Query: 220 TSPA 209
SPA
Sbjct: 259 PSPA 262
>AL845154-1|CAI23600.1| 812|Homo sapiens chromosome 13 open reading
frame 8 protein.
Length = 812
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 388 IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQ----SPPGNWP 221
+ SPEP P++ + PKP++ S+ P T G A++ + + P W
Sbjct: 202 VPSPEPQKPAPVSPESVKATLSNPKPQKQ---SHFPETLGPPSASSPESPVLAASPEPWG 258
Query: 220 TSPA 209
SPA
Sbjct: 259 PSPA 262
>AK074894-1|BAC11273.1| 740|Homo sapiens protein ( Homo sapiens
cDNA FLJ90413 fis, clone NT2RP3000063, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 740
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 388 IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQ----SPPGNWP 221
+ SPEP P++ + PKP++ S+ P T G A++ + + P W
Sbjct: 130 VPSPEPQKPAPVSPESVKATLSNPKPQKQ---SHFPETLGPPSASSPESPVLAASPEPWG 186
Query: 220 TSPA 209
SPA
Sbjct: 187 PSPA 190
>AB058705-1|BAB47431.1| 821|Homo sapiens KIAA1802 protein protein.
Length = 821
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -3
Query: 388 IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQ----SPPGNWP 221
+ SPEP P++ + PKP++ S+ P T G A++ + + P W
Sbjct: 211 VPSPEPQKPAPVSPESVKATLSNPKPQKQ---SHFPETLGPPSASSPESPVLAASPEPWG 267
Query: 220 TSPA 209
SPA
Sbjct: 268 PSPA 271
>U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independent
ligand for the Lck SH2 domain p62 protein.
Length = 440
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 191 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 218
>U41806-1|AAA93299.1| 440|Homo sapiens p60 protein.
Length = 440
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 191 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 218
>BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 191 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 218
>BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 191 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 218
>BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 191 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 218
>BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein.
Length = 356
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 107 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 134
>BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome 1
protein.
Length = 368
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 271 GQHGAATTDQSPPGNWPTSPAPPRVQLATP 182
G G + PPGNW SP PPR A P
Sbjct: 119 GHFGWPGWEMGPPGNW--SPRPPRAGEARP 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,586,063
Number of Sequences: 237096
Number of extensions: 1673432
Number of successful extensions: 5194
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5175
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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