Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d09
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical pr... 31 0.64
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 30 1.5
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 30 1.5
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 30 1.5
L07143-1|AAB37089.2| 532|Caenorhabditis elegans P granule abnor... 29 2.6
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.6
AB120730-1|BAC87887.1| 532|Caenorhabditis elegans PGL-2 protein. 29 2.6
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 27 7.9
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = -3
Query: 388 IDSPEPDSFVPIAAHGAEVRRQQPKPRRALV*SN*PTTSGQHGAATTDQSPPGNWPTSPA 209
++ PEP+ P+ A V+ + P P++A+ P+T + + P + P P+
Sbjct: 810 VNVPEPEKKTPVLAKKTPVKPRDPSPKKAVPAK--PSTKTDAPPVSVKKPEPVSKPKEPS 867
Query: 208 PPRVQLATP 182
P + + +P
Sbjct: 868 PKKAEPNSP 876
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 388 IDSPEPDSFVPIAAHGAEVRRQQPKPRRA 302
+ +PEP+ P+ A A + + P P++A
Sbjct: 1000 VSAPEPEKKTPVLAKKAPAKPRDPSPKKA 1028
>Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical
protein T05F1.4 protein.
Length = 203
Score = 31.1 bits (67), Expect = 0.64
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 336 RYADNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQ 232
R +++S++ EH +N QQ + ++ P +NH+Q
Sbjct: 46 RRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQ 80
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 306 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 208
+H + Q QQ+Q EQ Q HH Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 306 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 208
+H + Q QQ+Q EQ Q HH Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 306 EHWYNQINQQRQDSTEQPPQTNHHQETGQHHLR 208
+H + Q QQ+Q EQ Q HH Q H+R
Sbjct: 200 QHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIR 232
>L07143-1|AAB37089.2| 532|Caenorhabditis elegans P granule
abnormality protein 2 protein.
Length = 532
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -3
Query: 565 KLSITIKSILANKFKLQ*TQIQLHYFKQHFQLFLNQMKSFSN 440
++ + IK+ + +++ Q LH+ Q F++FLN+ + F N
Sbjct: 285 QIPVEIKNRMFPGIRIRVLQDTLHFLHQLFKVFLNESQKFDN 326
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -3
Query: 316 KPRRALV*SN*PTTSGQHGAATTDQSPPGNWPTSPAPPRVQLATP*RN*PCHSHSVLTKT 137
KP A TT+ + TT P PT P+P V+ AT P S S T T
Sbjct: 480 KPTEAPTTEEPTTTTTEEPTTTTTTEEPTEAPTEPSPTTVE-ATEASTTPEASTSSETST 538
Query: 136 TE 131
TE
Sbjct: 539 TE 540
>AB120730-1|BAC87887.1| 532|Caenorhabditis elegans PGL-2 protein.
Length = 532
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -3
Query: 565 KLSITIKSILANKFKLQ*TQIQLHYFKQHFQLFLNQMKSFSN 440
++ + IK+ + +++ Q LH+ Q F++FLN+ + F N
Sbjct: 285 QIPVEIKNRMFPGIRIRVLQDTLHFLHQLFKVFLNESQKFDN 326
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 17 VSQCQFKY*CC*KLNKILVKKKWTI-*LGNAFTVNSSACLRCLRQNGMTVARLI 175
+ C F C LN L KK WT+ G + + + +R + NG V+ ++
Sbjct: 546 ILNCSFDDTACNYLNHGLTKKPWTLRNRGYGYPLTGTTDIRATQTNGQFVSAIL 599
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 327 DNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQETGQHH 214
D+ Q HD+ Y+Q QQ+ PPQ Q+ GQ++
Sbjct: 327 DDQQYHDD--YSQ--QQQYQMQNYPPQQQQQQQYGQYY 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,107,763
Number of Sequences: 27780
Number of extensions: 270907
Number of successful extensions: 1009
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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