Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d08
(659 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 196 2e-52
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 184 9e-49
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 184 9e-49
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 173 9e-46
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.85
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.85
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 3.4
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 3.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.0
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 6.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 7.9
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 196 bits (477), Expect = 2e-52
Identities = 81/189 (42%), Positives = 123/189 (65%)
Frame = +2
Query: 92 IKQDWWETAVFYQLNTRSFMXXXXXXXXXXXXXTTRLDYLKELGVDAAWLSPIFKSAMHD 271
+ +W++ A+ YQ+ RSF T R+D++ ++G DA WLSPI+KS D
Sbjct: 22 VDANWYKNALVYQIYPRSFQDSDGDGIGDLNGITARMDHIADIGADALWLSPIYKSPQVD 81
Query: 272 FGYDTTDYYTIQPEYGSMEDFEHLLKKANELNIKIVLELVPNHTSNESEWFLKSSNRDEY 451
FGYD +++ + P YG++ DF+ L+++A L +K++L+ VPNH+S+E WF KS R +
Sbjct: 82 FGYDISNFTDVDPVYGTLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKP 141
Query: 452 YSDWFIWESGHLDNMGIRKPPNNWVSVFRKSAWKYMANRDQYYLHQFGESQPDLNYRNPV 631
Y ++++W + N G R+PPNNW+SVF SAW++ R QYYLHQF QPDLNYR+
Sbjct: 142 YDEYYVWRDARIVN-GTRQPPNNWLSVFWGSAWQWNEERKQYYLHQFATGQPDLNYRSAA 200
Query: 632 VVDEIKNVI 658
+ E+KNV+
Sbjct: 201 LDQEMKNVL 209
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 184 bits (447), Expect = 9e-49
Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 2/210 (0%)
Frame = +2
Query: 35 IFVIIFSLSRVGARYENV--NIKQDWWETAVFYQLNTRSFMXXXXXXXXXXXXXTTRLDY 208
I + +LS V A ++ + N+K+D + YQ+ RSF +LD+
Sbjct: 5 IVFCLMALSIVDAAWKPLPENLKED----LIVYQVYPRSFKDSNGDGIGDIEGIKEKLDH 60
Query: 209 LKELGVDAAWLSPIFKSAMHDFGYDTTDYYTIQPEYGSMEDFEHLLKKANELNIKIVLEL 388
E+GVD WLSPI+ S M DFGYD ++Y + P +G++ D ++L+ A+E +KI+L+
Sbjct: 61 FLEMGVDMFWLSPIYPSPMVDFGYDISNYTDVHPIFGTISDLDNLVSAAHEKGLKIILDF 120
Query: 389 VPNHTSNESEWFLKSSNRDEYYSDWFIWESGHLDNMGIRKPPNNWVSVFRKSAWKYMANR 568
VPNHTS++ EWF S E Y++++IW G + N G R PP NWV VF SAW + R
Sbjct: 121 VPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVN-GKRVPPTNWVGVFGGSAWSWREER 179
Query: 569 DQYYLHQFGESQPDLNYRNPVVVDEIKNVI 658
YYLHQF QPDLNY NPVV+D+++NV+
Sbjct: 180 QAYYLHQFAPEQPDLNYYNPVVLDDMQNVL 209
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 184 bits (447), Expect = 9e-49
Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 2/210 (0%)
Frame = +2
Query: 35 IFVIIFSLSRVGARYENV--NIKQDWWETAVFYQLNTRSFMXXXXXXXXXXXXXTTRLDY 208
I + +LS V A ++ + N+K+D + YQ+ RSF +LD+
Sbjct: 5 IVFCLMALSIVDAAWKPLPENLKED----LIVYQVYPRSFKDSNGDGIGDIEGIKEKLDH 60
Query: 209 LKELGVDAAWLSPIFKSAMHDFGYDTTDYYTIQPEYGSMEDFEHLLKKANELNIKIVLEL 388
E+GVD WLSPI+ S M DFGYD ++Y + P +G++ D ++L+ A+E +KI+L+
Sbjct: 61 FLEMGVDMFWLSPIYPSPMVDFGYDISNYTDVHPIFGTISDLDNLVSAAHEKGLKIILDF 120
Query: 389 VPNHTSNESEWFLKSSNRDEYYSDWFIWESGHLDNMGIRKPPNNWVSVFRKSAWKYMANR 568
VPNHTS++ EWF S E Y++++IW G + N G R PP NWV VF SAW + R
Sbjct: 121 VPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVN-GKRVPPTNWVGVFGGSAWSWREER 179
Query: 569 DQYYLHQFGESQPDLNYRNPVVVDEIKNVI 658
YYLHQF QPDLNY NPVV+D+++NV+
Sbjct: 180 QAYYLHQFAPEQPDLNYYNPVVLDDMQNVL 209
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 173 bits (422), Expect = 9e-46
Identities = 86/214 (40%), Positives = 126/214 (58%), Gaps = 8/214 (3%)
Frame = +2
Query: 41 VIIFSLSRVGARYENVNIKQDWWETAVFYQLNTRSFMXXXXXXXXXXXXXTTRLDYLKEL 220
V++ L VG N + WW+ A+FYQ+ RSFM +L + E
Sbjct: 5 VVVVLLLAVGLGAGQNN--KGWWKNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLSHFIES 62
Query: 221 GVDAAWLSPIFKSAMHDFGYDTTDYYTIQPEYGSMEDFEHLLKKANELNIKIVLELVPNH 400
G+ A WLSPI +S M DFGYD +D+ + P +G+++D E L +A + N+K++L+LVPNH
Sbjct: 63 GITAIWLSPINRSPMVDFGYDISDFKDVDPIFGTIKDLEDLTAEAKKQNLKVILDLVPNH 122
Query: 401 TSNESEWFLKS-----SNRDEYYSDWFIWESGHLDNMG--IR-KPPNNWVSVFRKSAWKY 556
TS++ +WF S +N Y D++IW D+ G I+ K PNNW+SVF + W +
Sbjct: 123 TSDQHKWFQMSINNTNNNNTNKYKDYYIWVDPVKDDKGNPIKDKYPNNWLSVFNGTGWTF 182
Query: 557 MANRDQYYLHQFGESQPDLNYRNPVVVDEIKNVI 658
R Q+Y HQF + QPDLNYRN V +E+KN++
Sbjct: 183 HEGRKQFYFHQFYKQQPDLNYRNSDVREEMKNIM 216
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 24.6 bits (51), Expect = 0.85
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -2
Query: 637 NDNRVSVIQIGLRLAELVQIVL 572
N+N V+++GLRL++L+ + L
Sbjct: 41 NNNDTVVVKLGLRLSQLIDLNL 62
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 24.6 bits (51), Expect = 0.85
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 248 IFKSAMHDFGYDTTDYYTIQPEYGSMEDFEHLLKKANEL 364
IF ++ G + + Y+T G F +LK+AN L
Sbjct: 317 IFGHHLNRLGREISTYFTFTRPCGITLTFHEILKRANTL 355
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 112 NRGVLSAQYKVVHG 153
NRG+LSA Y V +G
Sbjct: 208 NRGLLSASYLVCYG 221
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 112 NRGVLSAQYKVVHG 153
NRG+LSA Y V +G
Sbjct: 84 NRGLLSASYLVCYG 97
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 251 FKSAMHDFGYDTTDYYTIQPEYGS 322
F+S + FG DY ++ E+ S
Sbjct: 370 FRSKPYRFGIQNGDYVVLETEWSS 393
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 251 FKSAMHDFGYDTTDYYTIQPEYGS 322
F+S + FG DY ++ E+ S
Sbjct: 76 FRSKPYRFGIQNGDYVVLETEWSS 99
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 638 QRQQGFCNSDRAETRRTGADSTDLCW 561
Q + G C S R ADS D W
Sbjct: 117 QNKAGACGSAITTAYRIHADSCDRLW 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,963
Number of Sequences: 438
Number of extensions: 4034
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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