Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20d07
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.42 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.8  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 80  LSTCQTQTIRSNKQIPVPM 136
           LSTC   T+++N+  P PM
Sbjct: 252 LSTCTRTTLKNNRASPYPM 270


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +1

Query: 160 LPSNYLDPGPCFLCFCQGNGTAACWRRENRRCDAESYHYHGIGKRGTRVRRGL 318
           L +N + PGP  +  C+G+             +  + H+HG+ +RG++   G+
Sbjct: 165 LTANRMIPGPS-IQVCEGDKVVIDVENHIEGNEV-TLHWHGVWQRGSQYYDGV 215


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +1

Query: 160 LPSNYLDPGPCFLCFCQGNGTAACWRRENRRCDAESYHYHGIGKRGTRVRRGL 318
           L +N + PGP  +  C+G+             +  + H+HG+ +RG++   G+
Sbjct: 165 LTANRMIPGPS-IQVCEGDKVVIDVENHIEGNEV-TLHWHGVWQRGSQYYDGV 215


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 445 CTVCDCDA 468
           CTVC CDA
Sbjct: 774 CTVCTCDA 781


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -2

Query: 155 RLK**PTSGQESVCLIV*FVSDRYSAVTRAGTKRASTSMLSHRPVTAPGER 3
           RLK     G  S   +  FV D    +   G       MLSH+ + A GER
Sbjct: 295 RLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGER 345


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 163 PSNYLDPGPCFLCFCQGNGTAAC 231
           P  Y+D    F+CF     T  C
Sbjct: 213 PEEYVDGSIVFVCFSLVEDTLPC 235


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 124 SCPDVGYYFKRELP 165
           S  D+G +FKR LP
Sbjct: 162 SASDLGVFFKRFLP 175


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 232 WRRENRRCDAESYHYHGIGKRGTRVRRGLA 321
           W+++NR  DA   ++   G    +V  G+A
Sbjct: 227 WQQQNRNADAAIRYWLDGGADPQKVTIGIA 256


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 353 LVASRKNMSPKARPRRTLVPRFPIP 279
           LV ++  +   ++P+  L+P+ P+P
Sbjct: 30  LVLNKYLLVKHSKPKMPLLPKTPLP 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,969
Number of Sequences: 336
Number of extensions: 3044
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)