Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d03
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical ... 31 0.68
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 29 2.1
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 2.7
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 2.7
Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical pr... 29 3.6
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 3.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.6
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical ... 29 3.6
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 28 4.8
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 28 4.8
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical... 28 4.8
Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical pr... 28 6.3
U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid... 28 6.3
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 6.3
AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical ... 28 6.3
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical
protein F13C5.1 protein.
Length = 437
Score = 31.1 bits (67), Expect = 0.68
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 415 DDNAHLGNLVIACNIISLGYYSIQ-YNREWGWYTAGAGLLAYFVAPPSGLRVMYPLSLAL 591
DDN++ N+ A NI L YYS++ +N L+YF+ S + S
Sbjct: 354 DDNSYAANICSAANIPFLAYYSVEMFNIV---IFIPKTFLSYFLVSFSTFSISSSSSTHR 410
Query: 592 MEYCAYRLFHI 624
C Y L HI
Sbjct: 411 FSICTYVLSHI 421
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Frame = -3
Query: 577 KDTSPASPRGEPRNTPTIQPQLC-----TSPTPCYTESNNTPKILYYKL*PDYRD--VRC 419
K T+PA P PT P C T PC +S N P Y P D +C
Sbjct: 247 KPTTPAPPTTSTAPPPTTTPNPCLAFNCTGSGPCQLDSLNRP---YCTNCPGDMDGYTQC 303
Query: 418 RHRQVPKQMEQYRILGESRS---KPGYRGTSRPSNTAKLNTLMLYNL 287
+ + I +R PGY + S+ N+ +YNL
Sbjct: 304 QQVACSAAGTNFTIGTNNRGVWYSPGYNSNNTNSSVVPANSNCIYNL 350
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 598 IPSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTPKIL 458
+P+AP+ SPA+P+ P P+L + T TES+ T +L
Sbjct: 262 VPTAPDVTSESPATPQPSPPAVTPPPPRLLPAAT---TESHQTEPVL 305
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 467
PS+P+ +SP+ PR +PT TSPT T +P
Sbjct: 1656 PSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSP 1698
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNT 470
PS+P TSP+ P+ +PT PQ S +P YT S+ T
Sbjct: 1725 PSSPTYSPTSPSYSPTSPQYSPT-SPQYSPS-SPTYTPSSPT 1764
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTP 467
PS+P+ +SP+ PR +PT TSPT T +P
Sbjct: 1663 PSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSP 1705
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNT 470
PS+P TSP+ P+ +PT PQ S +P YT S+ T
Sbjct: 1732 PSSPTYSPTSPSYSPTSPQYSPT-SPQYSPS-SPTYTPSSPT 1771
>Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSP-TPCYTESNNTPK 464
P + +S +SP S R P +P + C+ P TP + ++ +P+
Sbjct: 289 PPSADSGVSSPMSARSAPYASPHVPQGTCSGPTTPSFNQTRLSPR 333
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRG--EPRNTPTIQPQLCTSPTPCYTESNNT 470
P P S T+P +P P PT+ P T+PT + + T
Sbjct: 653 PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTT 696
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRG--EPRNTPTIQPQLCTSPTPCYTESNNT 470
P P S T+P +P P PT+ P T+PT + + T
Sbjct: 709 PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTT 752
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRG--EPRNTPTIQPQLCTSPTPCYTESNNT 470
P P S T+P +P P PT+ P T+PT + + T
Sbjct: 532 PVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTT 575
>AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 595 PSAPNSKDTSPASPRGEPRNTPTIQPQLCTSP-TPCYTESNNTPK 464
P + +S +SP S R P +P + C+ P TP + ++ +P+
Sbjct: 289 PPSADSGVSSPMSARSAPYASPHVPQGTCSGPTTPSFNQTRLSPR 333
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 610 YMHNIPSAPNSKDTSPASPRGEPRNTPT 527
Y H P+AP + T+P P + N PT
Sbjct: 54 YYHQQPAAPPQQHTNPQQPPQQQYNVPT 81
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 610 YMHNIPSAPNSKDTSPASPRGEPRNTPT 527
Y H P+AP + T+P P + N PT
Sbjct: 54 YYHQQPAAPPQQHTNPQQPPQQQYNVPT 81
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 610 YMHNIPSAPNSKDTSPASPRGEPRNTPT 527
Y H P+AP + T+P P + N PT
Sbjct: 54 YYHQQPAAPPQQHTNPQQPPQQQYNVPT 81
>AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical
protein Y60A3A.19a protein.
Length = 228
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 445 IACNIISLGYYSIQYNREWGWYTA---GAGLLAYFVAPPSGLRVMYPLSLALMEYC 603
I C ++ L Y+ ++ N W G + YF+A G V Y L ++ YC
Sbjct: 103 IRCVLLPLPYFRMKLNIVVSWIITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYC 158
>Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical
protein C13B4.1b protein.
Length = 950
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/91 (24%), Positives = 30/91 (32%)
Frame = -3
Query: 574 DTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTPKILYYKL*PDYRDVRCRHRQVPKQ 395
D +P + P T C CYT NN + Y L Y + Q
Sbjct: 554 DYTPPTAAPPPSGKGTFDSSTCGKDKACYTPPNNVDTVAYKVLNDSYIEFEISSTQ-SSS 612
Query: 394 MEQYRILGESRSKPGYRGTSRPSNTAKLNTL 302
Y LG S G P+N + ++L
Sbjct: 613 SGVYTALGFSND-----GKMNPANVIECSSL 638
>Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical
protein C13B4.1a protein.
Length = 1010
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/91 (24%), Positives = 30/91 (32%)
Frame = -3
Query: 574 DTSPASPRGEPRNTPTIQPQLCTSPTPCYTESNNTPKILYYKL*PDYRDVRCRHRQVPKQ 395
D +P + P T C CYT NN + Y L Y + Q
Sbjct: 554 DYTPPTAAPPPSGKGTFDSSTCGKDKACYTPPNNVDTVAYKVLNDSYIEFEISSTQ-SSS 612
Query: 394 MEQYRILGESRSKPGYRGTSRPSNTAKLNTL 302
Y LG S G P+N + ++L
Sbjct: 613 SGVYTALGFSND-----GKMNPANVIECSSL 638
>U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid
phosphatase protein1 protein.
Length = 449
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 379 SGIVPFALALAGDDNAHLGNLVIAC 453
+G VP A+ DD HLGN+ C
Sbjct: 143 AGYVPIAVHTVDDDTDHLGNMESTC 167
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 619 ETVYMHNIPSAPNSKDTSPASPRGEPRNTPTIQP---QLCTSPTPCYTESNNTP 467
E+ +HN+P+ P+S T S P T + P L T+PT T + P
Sbjct: 501 ESTVVHNLPTKPSSAPTLHPSTFSPPLVTSSENPFTFTLDTTPTSTVTPMTSPP 554
>AF039039-4|AAB94177.2| 591|Caenorhabditis elegans Hypothetical
protein T08B1.1 protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = -1
Query: 510 VPAPLPVILNRIIPQRYYITSYNQITEMCVVVTGKCQSKWNNT 382
V +PL + + ++ + N ++E C V+ +WNNT
Sbjct: 255 VSSPLAIGFMLFLESPRWLIARNDLSEACEVLNDIAHQRWNNT 297
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -3
Query: 277 HR*SRC*ICRFGNAETRVFRERRNSHASRDVCNFCRAC-D*FPGRRHNITQRELS 116
H+ C C F + F+E H+ + + C C +P + H IT ++S
Sbjct: 206 HKKYSCTNCDFETENEKTFKEHSKQHSRQLIMYGCALCATSYPSQLHLITHVQMS 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,025,796
Number of Sequences: 27780
Number of extensions: 391885
Number of successful extensions: 1588
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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