Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d02
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 208 2e-54
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 208 2e-54
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 208 2e-54
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 208 2e-54
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 204 5e-53
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 204 5e-53
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 203 7e-53
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 203 7e-53
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 203 7e-53
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 201 4e-52
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 201 4e-52
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 198 3e-51
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 192 2e-49
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 187 6e-48
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 182 2e-46
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 149 2e-36
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 121 4e-28
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 121 5e-28
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 113 1e-25
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 107 6e-24
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 107 6e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 101 3e-22
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 101 3e-22
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 66 1e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 66 1e-11
Z79759-6|CAB02135.3| 452|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 28 4.6
U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical pr... 28 6.0
U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosi... 27 8.0
AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyros... 27 8.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 208 bits (508), Expect = 2e-54
Identities = 96/162 (59%), Positives = 121/162 (74%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+H+GQAGVQ+G ACW+LYCLEHGI+PDG +P+ ++ + DS F+TFFSE G+
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDS-FSTFFSETGSGR 60
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR VMVDLE TVIDE+R+G YR L+HPEQLITGKEDAANNYARGHY+ G+E++ ++
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD CTGLQ LLME+LS ++G
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 208 bits (508), Expect = 2e-54
Identities = 96/162 (59%), Positives = 121/162 (74%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+H+GQAGVQ+G ACW+LYCLEHGI+PDG +P+ ++ + DS F+TFFSE G+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDS-FSTFFSETGSGR 59
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR VMVDLE TVIDE+R+G YR L+HPEQLITGKEDAANNYARGHY+ G+E++ ++
Sbjct: 60 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 119
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD CTGLQ LLME+LS ++G
Sbjct: 120 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 161
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 208 bits (508), Expect = 2e-54
Identities = 96/162 (59%), Positives = 121/162 (74%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+H+GQAGVQ+G ACW+LYCLEHGI+PDG +P+ ++ + DS F+TFFSE G+
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDS-FSTFFSETGSGR 60
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR VMVDLE TVIDE+R+G YR L+HPEQLITGKEDAANNYARGHY+ G+E++ ++
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD CTGLQ LLME+LS ++G
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 208 bits (508), Expect = 2e-54
Identities = 96/162 (59%), Positives = 121/162 (74%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+H+GQAGVQ+G ACW+LYCLEHGI+PDG +P+ ++ + DS F+TFFSE G+
Sbjct: 2 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDS-FSTFFSETGSGR 60
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR VMVDLE TVIDE+R+G YR L+HPEQLITGKEDAANNYARGHY+ G+E++ ++
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD CTGLQ LLME+LS ++G
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 204 bits (497), Expect = 5e-53
Identities = 93/162 (57%), Positives = 120/162 (74%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI+PDGT+P T N +S F TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQST--NEGES-FTTFFSDTGSGR 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ+ITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD C+GLQ LLME+LS ++G
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG 160
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 204 bits (497), Expect = 5e-53
Identities = 93/162 (57%), Positives = 120/162 (74%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI+PDGT+P T N +S F TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQST--NEGES-FTTFFSDTGSGR 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ+ITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD C+GLQ LLME+LS ++G
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG 160
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 203 bits (496), Expect = 7e-53
Identities = 91/162 (56%), Positives = 118/162 (72%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI+PDGT+P+ D F TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPS---DQQADGESFTTFFSDTGNGR 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ+ITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD C+GLQ LLME+LS ++G
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG 160
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 203 bits (496), Expect = 7e-53
Identities = 95/167 (56%), Positives = 116/167 (69%)
Frame = +2
Query: 110 VLNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSE 289
V N RE IS+HVGQAGVQMG ACW+LYCLEHGI+PDG + E D FNTFFSE
Sbjct: 2 VNNRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINE-EDSLGVDDDSFNTFFSE 60
Query: 290 ADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVL 469
GK VPR +MVDLE T IDE+R+G Y+ L+HPEQL+TGKEDAANNYARGHY+ G+E++
Sbjct: 61 TMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEII 120
Query: 470 SPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
VM+R+R+L + C GLQ LLME+LS ++G
Sbjct: 121 DVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYG 167
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 203 bits (496), Expect = 7e-53
Identities = 91/162 (56%), Positives = 118/162 (72%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI+PDGT+P+ D F TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPS---DQQADGESFTTFFSDTGNGR 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ+ITGKEDAANNYARGHY+ G+E++ V++
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD C+GLQ LLME+LS ++G
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG 160
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 201 bits (490), Expect = 4e-52
Identities = 89/162 (54%), Positives = 117/162 (72%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI+PDGT+P+ + F TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPS---EQQNEGGSFTTFFSDTGNGR 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ+ITGKEDAANNYARGHY+ G+E++ ++
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD C+GLQ LLME+LS ++G
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG 160
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 201 bits (490), Expect = 4e-52
Identities = 89/162 (54%), Positives = 117/162 (72%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI+PDGT+P+ + F TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPS---EQQNEGGSFTTFFSDTGNGR 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ+ITGKEDAANNYARGHY+ G+E++ ++
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LAD C+GLQ LLME+LS ++G
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYG 160
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 198 bits (482), Expect = 3e-51
Identities = 89/162 (54%), Positives = 115/162 (70%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE +S+H+GQAGVQ+G ACW+LYCLEHGI PDG +P +T D +NTFFSE GK
Sbjct: 2 REIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPD-DTSYGVEDQSYNTFFSETPSGK 60
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TVIDEVR+G Y +L+HPEQLI+GKEDAANNYARGHY+ G+E++ VM+
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
R+R+L ++C LQ L+ME+LS ++G
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYG 162
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 192 bits (468), Expect = 2e-49
Identities = 88/162 (54%), Positives = 115/162 (70%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE IS+HVGQAGVQ+G ACW+LYCLEHGI PDGT + E D N+ TFFS+ G+
Sbjct: 2 REVISIHVGQAGVQIGNACWELYCLEHGILPDGT--SMEPDGNSGS--LGTFFSDTGYGR 57
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y++L+HPEQ++TGKEDAANNYARGHY+ G+E++ ++
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIR+LA+ C GLQ +LME+LS E+G
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYG 159
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 187 bits (455), Expect = 6e-48
Identities = 89/168 (52%), Positives = 114/168 (67%)
Frame = +2
Query: 107 PVLNMQRECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFS 286
P RE IS+HVGQAGVQ+G ACW+L+CLEHGI+PDG +T ++ NTFF+
Sbjct: 2 PQYKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETET-INTFFA 60
Query: 287 EADRGKMVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREV 466
E GK VPR + VDLE TV+DEVR+G YR L+HPEQL++GKEDAAN YARG Y+ GRE+
Sbjct: 61 ETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 120
Query: 467 LSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
+ VM+R+++LA+ C GLQ LLME+LS E+G
Sbjct: 121 IDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYG 168
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 182 bits (442), Expect = 2e-46
Identities = 83/162 (51%), Positives = 107/162 (66%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
REC+S+H+GQAG Q+G ACW+LYC+EHG+ G L E + N FFSE+ GK
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLK--EEEKNKKQQSLQAFFSESMNGK 63
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR + VDLE TV+DE+R+G Y L+HP+Q+I GKEDAANNYARGHY+ G+E++ V++
Sbjct: 64 HVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLD 123
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFG 610
RIRK + C GLQ LLME+LS EFG
Sbjct: 124 RIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFG 165
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 149 bits (360), Expect = 2e-36
Identities = 71/141 (50%), Positives = 94/141 (66%)
Frame = +2
Query: 188 LYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGKMVPRVVMVDLEATVIDEVRSG 367
++CLEHGI+PDG +T ++ NTFF+E GK VPR + VDLE TV+DEVR+G
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETET-INTFFAETAGGKHVPRCLFVDLEPTVVDEVRTG 59
Query: 368 EYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXX 547
YR L+HPEQL++GKEDAAN YARG Y+ GRE++ VM+R+++LA+ C GLQ
Sbjct: 60 TYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSF 119
Query: 548 XXXXXXXXXXLLMEKLSDEFG 610
LLME+LS E+G
Sbjct: 120 GGGTGSGFLSLLMERLSTEYG 140
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 121 bits (292), Expect = 4e-28
Identities = 62/161 (38%), Positives = 91/161 (56%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE + V GQ G Q+G W++ EHGI+PDGT ETD + +++EA+ GK
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKG-ETDLQLER--IDVYYNEANNGK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR V+VDLE +D VRSG + QL+ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
IRK A+ C LQ LL+ K+ +E+
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 121 bits (291), Expect = 5e-28
Identities = 62/161 (38%), Positives = 91/161 (56%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE + V GQ G Q+G W++ EHGI+PDGT E+D + +++EA+ GK
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKG-ESDLQLER--IDVYYNEANNGK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR V+VDLE +D VRSG + QL+ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
IRK A+ C LQ LL+ K+ +EF
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEF 159
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 121 bits (291), Expect = 5e-28
Identities = 61/161 (37%), Positives = 91/161 (56%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE + V GQ G Q+G W++ EHGI+PDGT E+D N +++EA+ GK
Sbjct: 2 REIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKG-ESDLQLER--INVYYNEANGGK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR V+VDLE +D VRSG + QL+ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
+RK A+ C LQ LL+ K+ +E+
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 113 bits (271), Expect = 1e-25
Identities = 56/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE + + GQ G Q+G W++ EHGI P G A D + N +++EA GK
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTG---AYNGDSDLQLERINVYYNEASGGK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR +VDLE +D VR+G + QL+ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
+RK A+ C LQ LL+ K+ +E+
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEY 159
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 107 bits (257), Expect = 6e-24
Identities = 55/161 (34%), Positives = 84/161 (52%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE + + GQ G Q+G W++ EHGI P G D + N +++EA K
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVG---DSDLQLERINVYYNEAGSNK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR V+VDLE +D VRSG + QL+ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
+RK A+ LQ LL+ K+ +E+
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 107 bits (257), Expect = 6e-24
Identities = 55/161 (34%), Positives = 84/161 (52%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
RE + + GQ G Q+G W++ EHGI P G D + N +++EA K
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVG---DSDLQLERINVYYNEAGSNK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR V+VDLE +D VRSG + QL+ P+ + G+ A NN+A+GHY+ G E++ V++
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
+RK A+ LQ LL+ K+ +E+
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 101 bits (243), Expect = 3e-22
Identities = 52/161 (32%), Positives = 85/161 (52%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
+E I+V VGQ G Q+G W+ EHG++ DGT D + +++ E + K
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKG---DNGSQLERITSYYKEMEGRK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR ++VDL+ I+ VRS +Y +L+ PE ++G+ A NN++RG+Y G E++ V+
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
IR+ A+ L+ LL+ KL +E+
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 101 bits (243), Expect = 3e-22
Identities = 52/161 (32%), Positives = 85/161 (52%)
Frame = +2
Query: 125 RECISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGK 304
+E I+V VGQ G Q+G W+ EHG++ DGT D + +++ E + K
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKG---DNGSQLERITSYYKEMEGRK 58
Query: 305 MVPRVVMVDLEATVIDEVRSGEYRQLYHPEQLITGKEDAANNYARGHYSTGREVLSPVME 484
VPR ++VDL+ I+ VRS +Y +L+ PE ++G+ A NN++RG+Y G E++ V+
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
IR+ A+ L+ LL+ KL +E+
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 66.5 bits (155), Expect = 1e-11
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +2
Query: 134 ISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGKMVP 313
++VHVGQ G Q+ A W+ EHGI G E D N + F +AD VP
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ-TTHEDDMNDKK---DLLFYQADDDHYVP 63
Query: 314 RVVMVDLEATVID-EVRSGEYRQLYHPEQLITGKE--DAANNYARGHYSTGREVLSPVME 484
R V+VDLE VI+ ++S + L++ + + A NN+A G Y G+EV +M+
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMD 122
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
I + A+ L LL+E+L + F
Sbjct: 123 IIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAF 163
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 66.5 bits (155), Expect = 1e-11
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +2
Query: 134 ISVHVGQAGVQMGVACWQLYCLEHGIRPDGTLPACETDPNTADSCFNTFFSEADRGKMVP 313
++VHVGQ G Q+ A W+ EHGI G E D N + F +AD VP
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ-TTHEDDMNDKK---DLLFYQADDDHYVP 63
Query: 314 RVVMVDLEATVID-EVRSGEYRQLYHPEQLITGKE--DAANNYARGHYSTGREVLSPVME 484
R V+VDLE VI+ ++S + L++ + + A NN+A G Y G+EV +M+
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMD 122
Query: 485 RIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEF 607
I + A+ L LL+E+L + F
Sbjct: 123 IIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAF 163
>Z79759-6|CAB02135.3| 452|Caenorhabditis elegans Hypothetical
protein ZK858.7 protein.
Length = 452
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = -2
Query: 218 QVGSRAPSSIAASTRRPSGPRLGPRVRICTPSAYLKLE 105
Q S A SSI PS P L PRV + PSA LKLE
Sbjct: 82 QEASVATSSIDPEVTEPSEPSLDPRV-VIAPSA-LKLE 117
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -1
Query: 279 NVLKQESAVLGSVSQAGRVPSGRIPCSKQYSCQHATPIWTPAWPTCTD 136
N +K GS+S+A P+GR P Q S Q A +C D
Sbjct: 802 NAIKNRYFCCGSMSKANYCPTGRAPFKDQTSLQPTRCTMHAATSSCPD 849
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 4.6
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 325 HHDPRHHLPSISLRKKRIE---AGIRCIRISFTSGQGSVRSDPVLQAV*LPARDAHLDPG 155
HHD I+L KK + G+R IR + T V +D V A+ P R HL G
Sbjct: 659 HHDASTFSIDIALNKKGRDYEGGGVRYIRYNCT-----VPADEVGYAMMFPGRLTHLHEG 713
Query: 154 LAHVYG 137
LA G
Sbjct: 714 LATTKG 719
>U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical
protein C24A8.1 protein.
Length = 582
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -1
Query: 366 PERTSSI---TVASKSTITTLGTIF--PRSASEKNVLKQESAVLGSVSQAGRVPSGRIPC 202
P+R S+ V K I T G I PR KN+ ++ S + S+S GR+ S
Sbjct: 275 PDRPPSVLLEAVTLKCEIDTSGPILELPRPTYTKNMSRRFSDAVNSISSRGRMKSVSFGT 334
Query: 201 SKQYSCQH 178
S++ H
Sbjct: 335 SRKRRHSH 342
>U53332-11|AAK31531.1| 668|Caenorhabditis elegans Protein tyrosine
phosphatase protein2 protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 221 RQVGSRAPSSIAASTRRPSGPRLGPR 144
RQV S PSS A+S S PR GP+
Sbjct: 619 RQVTSSRPSSSASSRTSHSRPRTGPQ 644
>AF015882-1|AAC21678.1| 668|Caenorhabditis elegans protein tyrosine
phosphatase protein.
Length = 668
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2
Query: 221 RQVGSRAPSSIAASTRRPSGPRLGPR 144
RQV S PSS A+S S PR GP+
Sbjct: 619 RQVTSSRPSSSASSRTSHSRPRTGPQ 644
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,222,442
Number of Sequences: 27780
Number of extensions: 250784
Number of successful extensions: 801
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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