Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d01
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 132 3e-32
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 79 6e-16
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 30 0.34
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 28 1.1
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 1.8
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 27 1.8
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 27 2.4
SPAC19B12.08 |||peptidase family C54|Schizosaccharomyces pombe|c... 27 2.4
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 27 2.4
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 27 2.4
SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces pom... 27 2.4
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 3.2
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 26 5.6
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 7.4
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 25 7.4
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 7.4
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 9.8
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 9.8
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 25 9.8
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 25 9.8
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 132 bits (320), Expect = 3e-32
Identities = 65/202 (32%), Positives = 110/202 (54%)
Frame = +1
Query: 61 IKFKLKDDNRSTFRNVFTKLRTLLPFLWPKKNFILQLYVLICILALIAGRAINLYVPIYN 240
+K K + ++ F TLLP+LWP K++ LQ + ICI+ L GRA+N+ P
Sbjct: 227 LKSTSKKPSDKSWAEYFRSFSTLLPYLWPTKDYRLQFQIFICIVLLFLGRAVNILAPRQL 286
Query: 241 RLIFNSISEPPLSFRWDLVLIYVFFKFLQXXXXXXXXXXXXXRSFLWIKVQQYTTRELEL 420
++ +++ W V+++V ++FLQ RSFLW+ V QY R +
Sbjct: 287 GVLTEKLTKHSEKIPWSDVILFVIYRFLQ----GNMGVIGSLRSFLWVPVSQYAYRAIST 342
Query: 421 ELFKHLHDLPLRWHLSRKTGEVLRVMDRGTDSINNLLSYILFSITPTLVDILVAVIYFVT 600
+ +H+ +L +HL+++ GEVL + +G+ S+N ++F I P L+D+ VA++YF
Sbjct: 343 KALRHVLNLSYDFHLNKRAGEVLTALTKGS-SLNTFAEQVVFQIGPVLLDLGVAMVYFFI 401
Query: 601 AFNIWFGLIVFTTMILYIIATI 666
F+I+F LIV + Y T+
Sbjct: 402 KFDIYFTLIVLIMTLCYCYVTV 423
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 79.0 bits (186), Expect = 6e-16
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 6/219 (2%)
Frame = +1
Query: 28 NHLSVKTEDQDIKFKLKDDNRSTFRNVFTKL--RTLLPFLWPKKNFILQLYVLICILALI 201
N+ S + E + KL D +NV ++ + +L ++WPK L++ V+ + L+
Sbjct: 69 NNKSKEKEPLNTSVKLASDVPDD-KNVTGQMIVKDMLQYIWPKGKTNLKVRVVSALALLV 127
Query: 202 AGRAINLYVPIYNRLIFNSISEP---PLSFRWDLV-LIYVFFKFLQXXXXXXXXXXXXXR 369
A + +N+ VP Y + I ++++ + W V + + + F + R
Sbjct: 128 AAKILNVQVPFYFKSIIDTMNTTLVQEVGALWSTVGAVVLGYGFARIFSTVFQEL----R 183
Query: 370 SFLWIKVQQYTTRELELELFKHLHDLPLRWHLSRKTGEVLRVMDRGTDSINNLLSYILFS 549
+ ++ V Q R + +++HL +L + +HLS++TG + R MDRGT I+ +LS ++
Sbjct: 184 NSVFAIVSQSAIRSVSSNVYQHLLNLDMNFHLSKQTGSITRAMDRGTKGISFILSSMVLH 243
Query: 550 ITPTLVDILVAVIYFVTAFNIWFGLIVFTTMILYIIATI 666
I P ++I + + F I TT+ LY + T+
Sbjct: 244 IIPITLEIAMVSGILTYKYGPSFSAIAATTVALYALFTV 282
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 566 TSVGVIENRMYERRLFIESVPRSITLRTSPVLRDKCQRKG 447
T GVI + + RL + S P LR +P+L + C+ G
Sbjct: 295 TVYGVIHKKFHAVRLTLRSRPAGFGLRCNPILHEICRCAG 334
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 390 DLDPQKRTHIIQ*THSAGTPSLEELEKHIYQYQIPAEGERRFR 262
D DP HI+ T +L+E+E I + P ERRFR
Sbjct: 213 DKDPPLYLHIVSHNRKDLTVALQEIESWINKDMGPLIDERRFR 255
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 633 KNDQSEPNIERRDKIDDCHQDIDQRWSDREQNVREEIVYRI 511
K ++ + ER K+ Q+ D+ REQ +REE RI
Sbjct: 661 KREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRI 701
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 657 DNIQDHCSKNDQSEPNIERRDKIDDCHQDIDQRWSDREQNVREEIVYRIRSS 502
DN D C++ND SE + + K+D Q +DRE+ V+ IV + S
Sbjct: 474 DN-DDLCTENDSSEGDSDSLKKVDFLGQIAMMSATDREE-VKSSIVVSTKKS 523
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 61 IKFKLKDDNRSTFRNVFTKLRTLLPFLWPKKNFILQLYVLICILALIAGRAINLYVPIYN 240
+KF D RS + L+ ++ L ++L ++ I IL L+ G LYV I
Sbjct: 1024 VKFLKLDYLRSLMNKL--NLKIVMRSLVMALKYLLLAFLGIFILPLLLGAIWELYVAIPF 1081
Query: 241 RLIFN 255
R IFN
Sbjct: 1082 RTIFN 1086
>SPAC19B12.08 |||peptidase family C54|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 120 AHTPTVPVAEEEFHPPTL 173
AHT T P +EE FH TL
Sbjct: 239 AHTTTQPASEETFHSATL 256
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 362 ICVRFCGSRSNNT-PQESWSWNCSSISMTCLYAGIC 466
+C+R+C S+SN WS S I++ ++ G C
Sbjct: 342 LCLRYCYSQSNEIGTNVLWSMTTSFINIWRIHPGTC 377
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 359 IICVRFCGSRSNNTPQESWSWNCSSISMTCLY 454
I+C F + T + W W C + +MTC+Y
Sbjct: 138 IVCKFFL--EACETGKYGWLWQCPNGNMTCIY 167
>SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 141 VAEEEFH-PPTLCAHMYTGS 197
+AEE H PP +C H Y+GS
Sbjct: 224 LAEERKHYPPKICLHSYSGS 243
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.6 bits (56), Expect = 3.2
Identities = 27/161 (16%), Positives = 68/161 (42%), Gaps = 1/161 (0%)
Frame = +1
Query: 175 VLICILALIAGRAINLYVPIYNRLIFNSISEPP-LSFRWDLVLIYVFFKFLQXXXXXXXX 351
+L+ +++ ++ +I+ ++ +++ S+ P SF W ++ +F FL
Sbjct: 866 ILLVMMSQVSLASIHFWIALWSGNSLFSLKLPSSFSFLWGYAIL-LFIYFLMDLS----- 919
Query: 352 XXXXXRSFLWIKVQQYTTRELELELFKHLHDLPLRWHLSRKTGEVLRVMDRGTDSINNLL 531
R+ + K + + + L + + PL W G +L + + +NLL
Sbjct: 920 -----RAITFAKGGRTASENIHDILSERVLYSPLHWFEKTAAGRILNRFSKDMYATDNLL 974
Query: 532 SYILFSITPTLVDILVAVIYFVTAFNIWFGLIVFTTMILYI 654
L + ++ IL+ ++ I+ F ++++Y+
Sbjct: 975 WASLEGMLLCVMAILITMLNVTLVMPIFMVPAAFVSLLVYL 1015
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 504 RNGFYKQSPLVHSVLYHSNAGRYLGGSHLFCH 599
R GF KQSP +S+ YLGG H
Sbjct: 102 RKGFLKQSPEAVEKAIYSHLPFYLGGDKCTVH 133
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 523 NLLSYILFSITPTLVDILVAVIYFVTAFNIWFGLIVFTTM 642
+L YIL S+ P + + I + TAF + GL F+++
Sbjct: 2016 SLFWYILHSLVPNIYALSTPFIIYATAFAL-AGLTTFSSL 2054
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 512 SVPRSITLRTSPVLRDKCQR 453
S+P+ I + TSP LR C+R
Sbjct: 111 SIPKCIGMYTSPHLRSVCER 130
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 371 RFCGSRSNNTPQESWSWNCSSISMTCLYAGICL 469
R C + P+ S ++ C SI C+ G+CL
Sbjct: 1251 RICEKCYSLVPRMSCTFCCLSIHGLCIVCGLCL 1283
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 383 IHKNERILFNKPIPPVPPPWRNLKNTYINTR 291
I + R+L P+ P PPP+ + K T T+
Sbjct: 759 IPRKRRVLPELPLAPDPPPFTSQKITLKQTK 789
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 426 VQASP*LAFTLAFVSQNRRSPQGDGPRNGFYKQSPL 533
+Q S L T AFV +N SPQ + P + F SPL
Sbjct: 237 IQNSNNLENTGAFV-ENANSPQSNTPLSTFRHSSPL 271
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 110 LRNCAHSYRSCGRRRISSSNSMCSYVYWLSLLE 208
L N + + + CG + S +S+ S V+WL +++
Sbjct: 302 LSNISLNQKLCGYAHLYSFSSVKSVVHWLQIIK 334
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 91 STFRNVFTKLRT-LLPFLWPKKNFILQLYVLICILALIAG 207
S+F +F K R L +WP L + + C+L L+ G
Sbjct: 52 SSFATLFPKYREKYLREVWPHVTRALDKFGITCVLDLVEG 91
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,913,582
Number of Sequences: 5004
Number of extensions: 66182
Number of successful extensions: 239
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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