Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20d01
(667 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 25 0.86
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 23 2.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.0
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 4.6
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 4.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 8.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 8.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.0
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 24.6 bits (51), Expect = 0.86
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 402 GVLLDLDPQKRTHIIQ*THSAGTPSLEELEKHIYQYQ--IPAEGERR 268
G+ + PQ T + SAGTP+ + IY+ Q + A RR
Sbjct: 607 GITIQEPPQWHTRSTEKRVSAGTPAAFNISTTIYENQNCLDASSSRR 653
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 186 YTGSHCWKSYQSIRPYIQQ 242
YTG C K+YQ ++ + +Q
Sbjct: 117 YTGDDCQKTYQYVQCHYKQ 135
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 504 RNGFYKQSPLVHSVLYHSNAGRYLGGSHLF 593
+N Y+++ ++ ++ N +YLGG H F
Sbjct: 87 KNDKYEENTILTTMPLLINVVKYLGGKHKF 116
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 644 IIVVKTISPNQILNAVTK*MTATKISTSV 558
I+ + +SPN+ +N+V TK++ +V
Sbjct: 77 IVYFELLSPNRTINSVVYIEQLTKLNNAV 105
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 398 YCWTLIHKNERILFNKPIPPVPPP 327
YC I + KP PP PPP
Sbjct: 325 YCLVNIVLGDSDTPPKPAPPPPPP 348
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 510 GFYKQSPLVHSVLYHSNA 563
G + + L+HS +YH +A
Sbjct: 1729 GLHPNNTLLHSFMYHEHA 1746
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 469 ETNASVKASHGDA*TVPAPTLLW 401
E N V A H A VP PT++W
Sbjct: 722 ERNKHV-ALHCQAQGVPTPTIVW 743
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 510 GFYKQSPLVHSVLYHSNA 563
G + + L+HS +YH +A
Sbjct: 1725 GLHPNNTLLHSFMYHEHA 1742
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 469 ETNASVKASHGDA*TVPAPTLLW 401
E N V A H A VP PT++W
Sbjct: 718 ERNKHV-ALHCQAQGVPTPTIVW 739
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/29 (24%), Positives = 13/29 (44%)
Frame = -2
Query: 570 IDQRWSDREQNVREEIVYRIRSSVHHPED 484
+ Q+W D Y +++HH +D
Sbjct: 113 LQQQWYDPRLRYSNRSQYEFLNAIHHYDD 141
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/29 (24%), Positives = 13/29 (44%)
Frame = -2
Query: 570 IDQRWSDREQNVREEIVYRIRSSVHHPED 484
+ Q+W D Y +++HH +D
Sbjct: 113 LQQQWYDPRLRYSNRSQYEFLNAIHHYDD 141
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/29 (24%), Positives = 13/29 (44%)
Frame = -2
Query: 570 IDQRWSDREQNVREEIVYRIRSSVHHPED 484
+ Q+W D Y +++HH +D
Sbjct: 164 LQQQWYDPRLRYSNRSQYEFLNAIHHYDD 192
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/29 (24%), Positives = 13/29 (44%)
Frame = -2
Query: 570 IDQRWSDREQNVREEIVYRIRSSVHHPED 484
+ Q+W D Y +++HH +D
Sbjct: 113 LQQQWYDPRLRYSNRSQYEFLNAIHHYDD 141
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/18 (33%), Positives = 14/18 (77%)
Frame = -1
Query: 61 YLDLLFSHLNDFEMDMTF 8
+ D+L H ++F+M++T+
Sbjct: 667 FKDILIYHKDEFDMNITY 684
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/18 (33%), Positives = 14/18 (77%)
Frame = -1
Query: 61 YLDLLFSHLNDFEMDMTF 8
+ D+L H ++F+M++T+
Sbjct: 667 FKDILIYHKDEFDMNITY 684
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = +1
Query: 85 NRSTFRNVFTKLRTLLPFLWPKKNFILQLYVLICILALIA 204
N T ++ L+ L F +++Q+Y+ C+L +++
Sbjct: 220 NSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVS 259
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = +1
Query: 85 NRSTFRNVFTKLRTLLPFLWPKKNFILQLYVLICILALIA 204
N T ++ L+ L F +++Q+Y+ C+L +++
Sbjct: 220 NSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVS 259
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,860
Number of Sequences: 438
Number of extensions: 4819
Number of successful extensions: 24
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -