Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20c23
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z67995-3|CAI79213.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 30 1.8
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 5.4
U80839-17|AAB37921.1| 372|Caenorhabditis elegans Serpentine rec... 28 7.1
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 27 9.4
U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical pr... 27 9.4
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 27 9.4
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 74.5 bits (175), Expect = 6e-14
Identities = 41/128 (32%), Positives = 62/128 (48%)
Frame = +3
Query: 300 CGVCGRHFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPSTT 479
C +C R F + KH+ C+K S RKPFD K R +G++ ++K +
Sbjct: 23 CPICDRRFIKSSLEKHESACRKLASLHRKPFDSGKQRASGSDLT--YADIKKVQHEKNKN 80
Query: 480 KVNKGKQLNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLXXXXXSENPDYVQCPHCN 659
+ +NWR++H FI A+ ++K+V L G L + DYVQC +C+
Sbjct: 81 G-GVFPRPQTNWRERHGNFIDAVSSSKRVDYALKTGAPLP--PPPKTAVPSDYVQCEYCS 137
Query: 660 RRFNQGAA 683
R FN AA
Sbjct: 138 RNFNAAAA 145
>Z67995-3|CAI79213.1| 150|Caenorhabditis elegans Hypothetical
protein M153.4 protein.
Length = 150
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 300 CGVCGRHFASDRIAKHQEIC-KKAHSKKRKPFDVLKHRLAGTEAEPFI 440
C +CGR F S IA H+ C KK H++ K K R A + E I
Sbjct: 39 CFICGRQFGSKSIAIHEPQCLKKWHAENEK-LPKSKRRAAPVKPEAVI 85
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 300 CGVCGRHFASDRIAKHQEIC 359
C CGR F DR++ HQ C
Sbjct: 111 CEHCGRKFNEDRLSVHQRSC 130
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 387 PFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKG 494
PFDV K R+ G + +PF K T T S +G
Sbjct: 217 PFDVAKSRIQGPQPDPFTRKYSGTMQTISLVYKEEG 252
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 408 RLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNS-NW 515
+L E+E FIN L K T VNKG+ L+ NW
Sbjct: 384 KLYCVESEKFINALLKPRVKVGTEWVNKGQNLDQVNW 420
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 318 HFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPST--TKVNK 491
HF + K E K+ +K+K LK TEAE +N T+ P T ++ K
Sbjct: 251 HFDLLKELKKDEEEKEKKKEKKKKGKGLKKAKKLTEAEKLLNNSTSTSVIPDTAVSRKPK 310
Query: 492 GKQLNSN 512
GK L +
Sbjct: 311 GKGLKKS 317
>U80839-17|AAB37921.1| 372|Caenorhabditis elegans Serpentine
receptor, class w protein97 protein.
Length = 372
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 457 VLRNLLIKGSASVPAKRCLSTSKGFLFLLWAFL 359
++R ++IK A++ +C GFL + W FL
Sbjct: 138 LIRYVIIKFGATMKFDKCSKPRFGFLVIFWCFL 170
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 348 QEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNSNWRQKH 527
Q IC+++ + LK E E +++ K T TPS + NK +S W K+
Sbjct: 215 QSICQESERLSK-----LKEESRVKEQEAEFSRMLKETETPSEYENNKSHPESSLWVNKY 269
Query: 528 E 530
E
Sbjct: 270 E 270
>U61949-8|AAU05569.1| 332|Caenorhabditis elegans Hypothetical
protein F49E8.7b protein.
Length = 332
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 574 CACTCFAARIAWMNSSCFCRQLLFNCLPLF 485
C+ AARI W + F LFNC PLF
Sbjct: 132 CSSIEDAARIEWDDEDVFTSTTLFNC-PLF 160
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 574 CACTCFAARIAWMNSSCFCRQLLFNCLPLF 485
C+ AARI W + F LFNC PLF
Sbjct: 310 CSSIEDAARIEWDDEDVFTSTTLFNC-PLF 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,493,003
Number of Sequences: 27780
Number of extensions: 246264
Number of successful extensions: 837
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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