Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20c22
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 200 9e-52
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 28 4.8
U58758-8|AAB93426.2| 379|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF125956-5|AAD14722.2| 353|Caenorhabditis elegans Serpentine re... 28 6.3
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 27 8.4
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical p... 27 8.4
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 27 8.4
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 27 8.4
Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical pr... 27 8.4
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 8.4
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 8.4
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 27 8.4
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 27 8.4
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 200 bits (487), Expect = 9e-52
Identities = 96/183 (52%), Positives = 131/183 (71%), Gaps = 4/183 (2%)
Frame = +1
Query: 91 VKKKIDNRIRVMIENGVKLGHRTMFLLIGDKSRDQVPILYDMLVKSTVKARPTVLWCYKN 270
++ K+D RIR IENGV GHR+MF ++GDK+RDQVPILY +L KSTV ARP VLWCYK
Sbjct: 1 MRTKLDGRIRTQIENGVASGHRSMFAVVGDKARDQVPILYHILSKSTVSARPNVLWCYK- 59
Query: 271 KDEAISNHXXXXXXXXXXXXLEVS----EESLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
K+ + S H +S + FD F +T I YY+E+ +LG T+GV
Sbjct: 60 KELSFSTHRAKKAKKMKKATTTISGSLPDADPFDVFISSTQIRYCYYNETEKILGNTFGV 119
Query: 439 CVLQDFEALTPNLMARTIETVEGGGLIIFLLKTMDSLRQLHSITMDVHSRFKTEAYDTVV 618
VLQDFEA+TPNL+ARTIET+EGGG++I L++++ SLRQL++I+MDVH+R++TEA++ +
Sbjct: 120 LVLQDFEAMTPNLLARTIETIEGGGMVILLMQSVRSLRQLYTISMDVHNRYRTEAHNEIT 179
Query: 619 NRF 627
RF
Sbjct: 180 ARF 182
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 162 HGAMAKFNSILYHNPDTIINFLFH 91
HG + NS +Y PD + NF H
Sbjct: 150 HGLYRQMNSAMYQTPDDVENFRIH 173
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 162 HGAMAKFNSILYHNPDTIINFLFH 91
HG + NS +Y PD + NF H
Sbjct: 150 HGLYRQMNSAMYQTPDDVENFRIH 173
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 162 HGAMAKFNSILYHNPDTIINFLFH 91
HG + NS +Y PD + NF H
Sbjct: 150 HGLYRQMNSAMYQTPDDVENFRIH 173
>U58758-8|AAB93426.2| 379|Caenorhabditis elegans Hypothetical
protein ZK1127.5 protein.
Length = 379
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +1
Query: 424 QTYGVCVLQDFEALTPNLMARTIETVEGGGLIIFLLKTMDSLRQLHSITMDVHSRFKTEA 603
+ Y VL D E L + AR ++ EGGG+++F + +LR + + + + +A
Sbjct: 136 KVYNKFVLND-EKLDIKIQARGLKP-EGGGVVVFTAPIVKTLRPVKRQQVGKVCKIRGQA 193
Query: 604 YDTVV 618
Y T V
Sbjct: 194 YVTKV 198
>Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical
protein F47B10.3 protein.
Length = 380
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Frame = -1
Query: 260 HQSTVGLAFTVDLTNISYKM---GT*SLLLS----PMRRNMVRWPSLTPFSIITLIRLSI 102
H S V ++ L N Y M S++++ P+ ++ RWP + F ITLI+ ++
Sbjct: 98 HDSVVSFCYSSFLFNFQYGMVLYSWQSIIVAVKKRPVTKSYTRWPYILLF-FITLIQAAL 156
Query: 101 FF-FTIFGYV 75
F+ I G++
Sbjct: 157 FWQIMILGFI 166
>AF125956-5|AAD14722.2| 353|Caenorhabditis elegans Serpentine
receptor, class h protein80 protein.
Length = 353
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -3
Query: 204 NGHLISAFVSNEKKHGAMAKFNSILYHNP--DTIINFLFHHFRICSIKSI-KLGSVK 43
N LI+ F + HG ++ F + H P + I++F S+KSI KL +K
Sbjct: 289 NQALINLFFIHMSLHGLLSTFVILFIHRPYREFILSFFMQTSSAASVKSIAKLTPIK 345
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 310 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 339
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 310 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 339
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical
protein F49E11.1d protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 284 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 313
>Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical
protein F49E11.1a protein.
Length = 508
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 317 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 346
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 168 KKHGAMAKFNSILYHNPDTIINFLFHHFRICSIKSIKLGSVKYCLKFYNLKFK 10
K HGA +K N I H P T++ + + K +VK L N +F+
Sbjct: 404 KGHGAGSKQNGIEQHKPQTVVEQPLTNGHASGVPEEKYEAVKMELDSKNREFE 456
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 168 KKHGAMAKFNSILYHNPDTIINFLFHHFRICSIKSIKLGSVKYCLKFYNLKFK 10
K HGA +K N I H P T++ + + K +VK L N +F+
Sbjct: 404 KGHGAGSKQNGIEQHKPQTVVEQPLTNGHASGVPEEKYEAVKMELDSKNREFE 456
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 SLFDAFRVATTIHGRYYSESHAMLGQTYGV 438
S FD R+ T I R+Y +LG YG+
Sbjct: 611 SCFDDQRIYTYIQSRFYRAPEVILGTKYGM 640
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 161 CFFSLETKAEIRCPFYMIC*SNR--Q*RLGQQYSGAIRTKMKQLAIM 295
C F ++ +++CPFY +C ++ Q G + G+ RTK+ I+
Sbjct: 122 CLFPYKS-GDLKCPFYFLCRRDKHAQETEGVESVGSARTKILDKGIL 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,176
Number of Sequences: 27780
Number of extensions: 293580
Number of successful extensions: 722
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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