Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20c22
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.5  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 460 LQNLAKRKLHMSDRALHD 407
           L +L +R L++SD  LHD
Sbjct: 320 LDDLTRRSLYLSDIPLHD 337


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 460 LQNLAKRKLHMSDRALHD 407
           L +L +R L++SD  LHD
Sbjct: 320 LDDLTRRSLYLSDIPLHD 337


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 490 LFVPSNWG*ELQNLAKRKLHMSDRALHDFLNNI 392
           LFV S +   L+ L  R L +SD  LHD   ++
Sbjct: 390 LFVSSPFLNGLEGLTGRGLFISDIPLHDATRDV 422


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 586 LSVHPLLLNVVVSENPWF 533
           + V P+  N+V+ + PW+
Sbjct: 60  VQVSPVQENIVIDKRPWW 77


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +1

Query: 148 GHRTMFLLIGDKSRDQVPILYDMLVKSTVKARPTVLWCYKNKDEAISN 291
           GHR +   I D+ +     LY  +    +  RPT        D  IS+
Sbjct: 269 GHRPIDDNIDDEFKGTYKTLYKQMWSQNITERPTTNEVITKIDTLISS 316


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,784
Number of Sequences: 438
Number of extensions: 3584
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)