Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20c19
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.6  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +3

Query: 147 RNDCE-YFIYWLYVSACTSFVCL 212
           RND E  + YW +    T  VCL
Sbjct: 312 RNDLERLYFYWSFALLITRIVCL 334


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +1

Query: 568 LLKILNSFFQYIYLFSQYQNLSN 636
           +L +LN+ F ++ +  Q++NL++
Sbjct: 500 ILGVLNALFTFLIVVVQFENLTS 522


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 328 CQFL*FQSTQLECALLFYYNILPSQCNY 245
           C F+ F    L C   FYY  +   C Y
Sbjct: 87  CPFIIFTVHFLLCTYYFYYAFIILLCVY 114


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 568 SFKIPKLKALTISYRLCLHLMSHRP 494
           +F +P+L +L  S R+C    S +P
Sbjct: 138 AFWVPQLGSLFRSSRMCFFKSSKKP 162


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 568 SFKIPKLKALTISYRLCLHLMSHRP 494
           +F +P+L +L  S R+C    S +P
Sbjct: 138 AFWVPQLGSLFRSSRMCFFKSSKKP 162


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 568 SFKIPKLKALTISYRLCLHLMSHRP 494
           +F +P+L +L  S R+C    S +P
Sbjct: 138 AFWVPQLGSLFRSSRMCFFKSSKKP 162


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 568 SFKIPKLKALTISYRLCLHLMSHRP 494
           +F +P+L +L  S R+C    S +P
Sbjct: 138 AFWVPQLGSLFRSSRMCFFKSSKKP 162


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 345 FEVVVNASFCD 313
           F+V++N+ FCD
Sbjct: 93  FQVILNSCFCD 103


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 345 FEVVVNASFCD 313
           F+V++N+ FCD
Sbjct: 93  FQVILNSCFCD 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,609
Number of Sequences: 336
Number of extensions: 3321
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)