Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20c19
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 39 0.005
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 38 0.006
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 33 0.23
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 32 0.54
SB_35985| Best HMM Match : Sushi (HMM E-Value=2.4) 31 0.72
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 31 0.95
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 31 1.2
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 30 1.7
SB_41991| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 28 8.8
SB_30323| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +1
Query: 1 IDLVINNAGIA-----NESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
+D++ N AG+ E K +++N ++ T + + MR+ G+I+N+
Sbjct: 85 VDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKMRQQ---GSGSIINM 141
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKT 324
+S+ + AP F Y +K+AV+ F+ I + Y G+R+ VC G T
Sbjct: 142 ASVASSIKGAPNRFAYGTSKAAVIGFTKAIAAD--YITKGIRVNAVCPGTIYT 192
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 38.7 bits (86), Expect = 0.005
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEV---EVNYIALVNGTL----KSLELMRKDKGGNGGTIV 159
+D+++NNAGI E+ + + E+ + + V G+ ++++ M +GGNGG IV
Sbjct: 86 LDVLVNNAGIL-ETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQGGNGGAIV 144
Query: 160 NISSIGCMCQHAPALFV-YMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIY 333
N+SS AP ++ Y K A+ S +G + + G+R+ V G+ +T I+
Sbjct: 145 NLSSAAARL-GAPGEYIDYAAVKGAI--DSMTLGLAKEVAADGIRVNAVRPGVIETEIH 200
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Frame = +1
Query: 1 IDLVINNAGIA-NESD---PKAIRKEVEVNYIALVNGTLKSLELMRKDKG-GNGGTIVNI 165
+D++ NNAGIA E+D A + +++N ++ GTL L+ M G+GGTIVN+
Sbjct: 85 LDILCNNAGIAVRENDLLRSGAWKTIIDINVKGVILGTLLGLDHMGVSGAKGHGGTIVNV 144
Query: 166 SSI 174
+S+
Sbjct: 145 ASL 147
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +1
Query: 1 IDLVINNAGIA-----NESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
ID+++NNAG+ +R+ VN+ +V T + M KG G I+NI
Sbjct: 278 IDVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLTKAVIPKM---KGNPSGHIINI 334
Query: 166 SSIGCMCQHAPALFVYMGTKSAV 234
SIG + + P +Y +K AV
Sbjct: 335 PSIGGI-RGVPFNAIYCSSKFAV 356
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.1 bits (72), Expect = 0.23
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Frame = +1
Query: 1 IDLVINNAGIANESDPK-----AIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
ID+++NNAGI P+ AI K E N L+ T + M+K + G+ +VNI
Sbjct: 116 IDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQRAGH---VVNI 172
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIYNNLK 345
S+ P +Y +K AV ++ + K ++ + G T +N K
Sbjct: 173 GSV-LGIVGTPFSEIYCASKFAVEGYAEAMA--PVLGKFNIKTTIIEPGPVATNFASNAK 229
Query: 346 SFDENIN 366
+ + ++
Sbjct: 230 AIRDEVD 236
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 33.1 bits (72), Expect = 0.23
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Frame = +1
Query: 1 IDLVINNAGIAN-----ESDPKAIRKEVEVN-------------YIALVNGTLKSLELMR 126
+ +++NNAGI + +++ I+K +EVN YI T+KS
Sbjct: 131 VTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTVKSFLPSM 190
Query: 127 KDKGGNGGTIVNISSIGCMCQHAPALFVYMGTKSAVLQFSNCIGRE-EYYSKTGVRILTV 303
K N G +VNI+S P + Y +K + F + E KTGV+ V
Sbjct: 191 LAK--NHGHVVNIASSAGFFG-VPGMCDYCSSKFGAVGFDESLRMELSSLGKTGVKTTVV 247
Query: 304 CFGITKTGIYNNLKS 348
C TG+++ +K+
Sbjct: 248 CPYYINTGMFDGVKT 262
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 106 KSLELMRKDKGGNGGTIVNISSI-GCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKT 282
+S+ D+ G G IVN+SSI G Q Y TK A+ + + R+ +K
Sbjct: 411 ESMATNTPDQEGERGVIVNVSSIHGTEGQSGKV--AYAATKGAINAMTLPMARD--LAKL 466
Query: 283 GVRILTVCFGITKTGIY 333
G+R+ T+ GI T ++
Sbjct: 467 GIRVNTISPGIFNTPMF 483
>SB_35985| Best HMM Match : Sushi (HMM E-Value=2.4)
Length = 391
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 504 HIDRWAIFSYEPGATAFTFLDCFYRTFGC 418
++DRW++F+ + FTF+DC Y F C
Sbjct: 56 YVDRWSVFTCVDRWSVFTFVDC-YSVFIC 83
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 31.1 bits (67), Expect = 0.95
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +1
Query: 1 IDLVINNAGIAN-----ESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
+D+++NNAGI + + I+K +E+N +A + L M + N G IV I
Sbjct: 1300 VDILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHFWTSRSFLGRMLEQ---NQGHIVTI 1356
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEY-YSKTGVRILTVCFGITKTGI 330
SS+ A + Y +K + F + + E Y K GV+ V TGI
Sbjct: 1357 SSVSGSFPTAFQV-EYCASKYGAVGFHDALSHELYTLGKDGVKTTLVQPFFFDTGI 1411
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 30.7 bits (66), Expect = 1.2
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Frame = +1
Query: 1 IDLVINNAGIAN----ESDPKAIRKEV-EVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
ID+++NNAGI++ E+ +++ KE N+ ++ + + M+ D G+ I+NI
Sbjct: 85 IDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKSDHSGH---IINI 141
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIG---RE---EYYSKTGVRILT--VCFGITK 321
SS P +Y +K AV S + R+ ++ TG + T V G K
Sbjct: 142 SSTAGH-TGMPFTGLYCASKFAVEGLSESLAPLLRKFGVKFALSTGYLVSTRLVIMGAVK 200
Query: 322 TGIYNNLKSFDENINKDM 375
+ I + +N+D+
Sbjct: 201 SRIAEKISKSPVPVNEDI 218
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Frame = +1
Query: 1 IDLVINNAGIAN-----ESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
+ ++INNAG+ + + +VN +A + + + M + N G IV+I
Sbjct: 113 VTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIWTIQRFIPSMMEK---NRGHIVSI 169
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEY-YSKTGVRILTVCFGITKTGIYNNL 342
+S+ + Y +K A + + RE + K G+ T+C T TG++ +
Sbjct: 170 ASVAGYFGLVGCVD-YCASKFAAVGLIEALRREIHGLGKMGIEFTTICPHFTATGMFAGV 228
Query: 343 K 345
K
Sbjct: 229 K 229
>SB_41991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 148 GTIVNISSIGCMCQHAPALFVYMGTKSAVLQFSN 249
G N GC CQ A FV GT +Q+SN
Sbjct: 64 GFCANRVFFGCKCQSAGVGFVVYGTSRQGMQYSN 97
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 174 WLYVSACTSFVCLHGDKECCVAI**LHW 257
W+YV C S C H + +I +HW
Sbjct: 486 WVYVGMCFSSFCWHNEDHWSYSINYMHW 513
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 27.9 bits (59), Expect = 8.8
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Frame = +1
Query: 4 DLVINNAGIAN-----ESDPKAIRKEVEVNYIA-LVNGTLKSLELMRKDKGGNGGTIVNI 165
DL++NNAG A E P++ + E N A L + +++ K G GG IVN+
Sbjct: 28 DLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIAQAVAKKMVAK---GEGGAIVNV 84
Query: 166 SSIGCMCQHAP---ALFVYMGTKSAVLQFSNCIGR-EEYYSKTGVRI 294
SS+ H P +L Y + + F G Y +K +RI
Sbjct: 85 SSVFTEL-HLPNSISLGKYSNAALSPVYFRRSDGNLNRYKTKESIRI 130
>SB_30323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/112 (23%), Positives = 48/112 (42%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVNISSIGC 180
+ L++ N N KA ++ V++ A NG L L+ + G + GC
Sbjct: 297 VSLLLENGAKVNT---KAFKRLAAVHFAA-ANGFRHVLRLLLQCGAKIDGKVQE----GC 348
Query: 181 MCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIYN 336
H ALF + T ++++ +G ++ + + L VC G++K N
Sbjct: 349 TSLHLAALFGHTKTVASLINSGANVGAKDLQAVSEGPRLEVCKGLSKESRLN 400
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,132,358
Number of Sequences: 59808
Number of extensions: 383726
Number of successful extensions: 756
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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