Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20c19
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP prot... 44 8e-05
At1g67730.1 68414.m07729 b-keto acyl reductase, putative (GLOSSY... 38 0.009
At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein] reduct... 33 0.14
At3g55290.2 68416.m06141 short-chain dehydrogenase/reductase (SD... 32 0.44
At3g55290.1 68416.m06140 short-chain dehydrogenase/reductase (SD... 32 0.44
At3g46170.1 68416.m04996 short-chain dehydrogenase/reductase (SD... 32 0.44
At2g17845.1 68415.m02067 short-chain dehydrogenase/reductase (SD... 32 0.44
At3g42960.1 68416.m04512 alcohol dehydrogenase (ATA1) identical ... 31 0.77
At4g05530.1 68417.m00842 short-chain dehydrogenase/reductase (SD... 30 1.4
At1g52340.1 68414.m05908 short-chain dehydrogenase/reductase (SD... 30 1.4
At3g55310.1 68416.m06143 short-chain dehydrogenase/reductase (SD... 30 1.8
At1g63490.1 68414.m07179 transcription factor jumonji (jmjC) dom... 30 1.8
At1g79620.1 68414.m09283 leucine-rich repeat transmembrane prote... 29 2.4
At1g63380.1 68414.m07166 short-chain dehydrogenase/reductase (SD... 28 5.5
At2g43040.1 68415.m05341 calmodulin-binding protein similar to p... 28 7.2
>At1g49670.1 68414.m05570 ARP protein (REF) identical to ARP protein
GB:CAA89858 GI:886434 from [Arabidopsis thaliana];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 629
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Frame = +1
Query: 1 IDLVINNAGIA-------NESD-PKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTI 156
+D+ INNAGI+ +++D K+ + + V+ IA+V GT +++ M+ + G I
Sbjct: 93 LDICINNAGISTPLRFDKDDTDGSKSWKHTINVDLIAVVEGTQLAIKAMKAKQ--KPGVI 150
Query: 157 VNISSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGI 330
+N+ S + P +Y +K+ V+ F+ + YY + G+RI +C KT +
Sbjct: 151 INMGSAAGLYP-MPVDPIYAASKAGVVLFTRSLA---YYRRQGIRINVLCPEFIKTDL 204
>At1g67730.1 68414.m07729 b-keto acyl reductase, putative (GLOSSY8)
similar to b-keto acyl reductase GI:2586127 from
[Hordeum vulgare]
Length = 318
Score = 37.5 bits (83), Expect = 0.009
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Frame = +1
Query: 1 IDLVINNAGIA-------NESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIV 159
+ ++INNAG++ +E D + I +++N T L M K K G I+
Sbjct: 131 VGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNMLKRKKG---AII 187
Query: 160 NISS-IGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRI 294
N+ S + P VY G K+ V QF+ C+ E Y K+G+ +
Sbjct: 188 NMGSGAAALIPSYPFYSVYAGAKTYVDQFTKCLHVE--YKKSGIDV 231
>At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein]
reductase, chloroplast / 3-ketoacyl-acyl carrier protein
reductase identical to 3-oxoacyl-[acyl-carrier protein]
reductase SP:P33207 from [Arabidopsis thaliana]
Length = 319
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKE-----VEVNYIALVNGTLKSLELMRKDKGGNGGTIVNI 165
ID+V+NNAGI ++ +++ + +N + T ++++M K K G I+NI
Sbjct: 155 IDVVVNNAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGR---IINI 211
Query: 166 SS-IGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFG 312
SS +G + A Y K V+ FS RE + + + VC G
Sbjct: 212 SSVVGLIGNIGQA--NYAAAKGGVISFSKTAAREG--ASRNINVNVVCPG 257
>At3g55290.2 68416.m06141 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 279
Score = 31.9 bits (69), Expect = 0.44
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVN--G---TLKSLELMRKDKGGNGGTIVNI 165
ID +INNAGI E E + + N G K + ++ +D GG+++NI
Sbjct: 101 IDALINNAGIRGNVKSSLDLSEDEWDNVFKTNLKGPWLVSKHVCMLMRD-AKRGGSVINI 159
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIYNNL 342
SSI + P Y +K V S + E K +R+ ++ G+ K+ I L
Sbjct: 160 SSIAGIRGMLPGGLAYACSKGGVDTMSRMMALELGVHK--IRVNSIAPGLFKSEITQGL 216
>At3g55290.1 68416.m06140 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 280
Score = 31.9 bits (69), Expect = 0.44
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVN--G---TLKSLELMRKDKGGNGGTIVNI 165
ID +INNAGI E E + + N G K + ++ +D GG+++NI
Sbjct: 102 IDALINNAGIRGNVKSSLDLSEDEWDNVFKTNLKGPWLVSKHVCMLMRD-AKRGGSVINI 160
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIYNNL 342
SSI + P Y +K V S + E K +R+ ++ G+ K+ I L
Sbjct: 161 SSIAGIRGMLPGGLAYACSKGGVDTMSRMMALELGVHK--IRVNSIAPGLFKSEITQGL 217
>At3g46170.1 68416.m04996 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 288
Score = 31.9 bits (69), Expect = 0.44
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Frame = +1
Query: 1 IDLVINNAGI-ANESDPKAIRKEVEVNYIA--LVNGTLKS---LELMRKDKGGNGGTIVN 162
ID +INNAGI N + KE N L L S LMR K GG+++N
Sbjct: 110 IDALINNAGIRGNVKSSLDLSKEEWDNVFKTNLTGPWLVSKYVCVLMRDAK--LGGSVIN 167
Query: 163 ISSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIYNNL 342
ISSI + P Y +K V S + E K +R+ ++ GI K+ I L
Sbjct: 168 ISSIAGIRGILPGALAYACSKIGVDTMSKMMAVELGVHK--IRVNSIAPGIFKSEITQGL 225
Query: 343 --KSFDENINK 369
K + +N+ +
Sbjct: 226 MQKEWFKNVTE 236
>At2g17845.1 68415.m02067 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 312
Score = 31.9 bits (69), Expect = 0.44
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVN--GTL---KSLELMRKDKGGNGGTIVNI 165
ID +INNAG E E + + N GT K + ++ +D GG+++NI
Sbjct: 132 IDALINNAGFRGNVKSSLDLSEDEWDKVFKTNLTGTWLVSKYVCILMRDAKRGGGSVINI 191
Query: 166 SSIGCMCQ-HAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGIYNNL 342
SS+ + + P Y +K V + + E K +R+ ++ G+ K+ I L
Sbjct: 192 SSVSWLHRGQVPGGVAYACSKGGVDTMTRMMALELGVYK--IRVNSIAPGLLKSEITQGL 249
>At3g42960.1 68416.m04512 alcohol dehydrogenase (ATA1) identical to
alcohol dehydrogenase (ATA1) GI:2501781 from
[Arabidopsis thaliana]
Length = 272
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +1
Query: 1 IDLVINNAGIA-NES-----DPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGNGGTIVN 162
+D++ NNAG++ NE D + K V VN +++G + + M K GG GG+I+
Sbjct: 83 LDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIKHAAKAMIK--GGRGGSIIC 140
Query: 163 ISS 171
SS
Sbjct: 141 TSS 143
>At4g05530.1 68417.m00842 short-chain dehydrogenase/reductase (SDR)
family protein similar to peroxisomal short-chain
alcohol dehydrogenase GI:4105190 from [Homo sapiens]
Length = 254
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGGN---GGTIVNISS 171
ID+V+ NA +DP KE ++ + +N +KS L+ +D + G +++ I+S
Sbjct: 89 IDIVVCNAAANPSTDPILSSKEAVLDKLWEIN--VKSSILLLQDMAPHLEKGSSVIFITS 146
Query: 172 IGCMCQHAPALFVYMGTKSAVLQFSNCIGRE 264
I A+ +Y TK+A+L + + E
Sbjct: 147 IAGFSPQG-AMAMYGVTKTALLGLTKALAAE 176
>At1g52340.1 68414.m05908 short-chain dehydrogenase/reductase (SDR)
family protein similar to stem secoisolariciresinol
dehydrogenase GI:13752458 from [Forsythia x intermedia]
Length = 285
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIR----KEVEVNYIALVNGTLKSLE-LMRKDKGGNGGTIVNI 165
+D++INNAG+ P IR E E+ + V G S++ R G+IV++
Sbjct: 100 LDILINNAGLCGAPCPD-IRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSL 158
Query: 166 SSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRI 294
S+G + Y+G+K AVL + + E + G+R+
Sbjct: 159 CSVGGVV-GGVGPHSYVGSKHAVLGLTRSVAAE--LGQHGIRV 198
>At3g55310.1 68416.m06143 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 298
Score = 29.9 bits (64), Expect = 1.8
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVNGTLKSLELMRK------DKGGNGGTIVN 162
ID +INNAGI E E + + N LK L+ K GG+++N
Sbjct: 120 IDALINNAGIRGNVKLSLDLSEDEWDNV--FNTNLKGPWLVAKYVCVLMRDAKRGGSVIN 177
Query: 163 ISSIGCMCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFGITKTGI 330
ISS+ + P Y +K V S + E K +R+ ++ G+ K+ I
Sbjct: 178 ISSVAGVRSIVPGGLAYSCSKGGVDTMSRMMAIELGVHK--IRVNSIAPGLFKSEI 231
>At1g63490.1 68414.m07179 transcription factor jumonji (jmjC)
domain-containing protein similar to PLU-1 protein
(GI:4902724) [Homo sapiens] and PLU1 (GI:22726257) [Mus
musculus]; similar to Retinoblastoma-binding protein 2
(RBBP-2) (SP:P29375) {Homo sapiens}; contains Pfam
PF02373: jmjC domain
Length = 1116
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 HCSCKWNIEIL-RTYAQGQRR*RRNDCEYFIYWLYVSACTSFVCLHGDKECCVAI**LHW 257
+C WN+ + + + R N + WLY+ S C H + C ++ LHW
Sbjct: 34 YCGSPWNLNNMPKLKGSMLQAIRHNINGVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHW 93
>At1g79620.1 68414.m09283 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
GI:1389566 from [Arabidopsis thaliana]
Length = 971
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVNGTLKSLELMRKDKGG 141
I+++I N+G ++ S A + L GTLK E D GG
Sbjct: 908 IEIIIQNSGASSSSSASASSSATDFGEKLLYGGTLKKKEARDGDGGG 954
>At1g63380.1 68414.m07166 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 287
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 1 IDLVINNAGIANESDPKAIRKEVEVNYIALVNGT-----LKSLELMRKDKGGNGGTIVNI 165
ID++INNAGI E E + + N T K + L+ +D GG+++N+
Sbjct: 106 IDVLINNAGIRGNVKSSLDLSEEEWDKVFRTNLTGSWLISKYVCLLMRD-AERGGSVINV 164
Query: 166 SSI 174
SSI
Sbjct: 165 SSI 167
>At2g43040.1 68415.m05341 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]; contains Pfam profile
PF00515: TPR Domain
Length = 704
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 181 MCQHAPALFVYMGTKSAVLQFSNCIGREEYYSKTGVRILTVCFG 312
+C P+L GT A +N G +E+ G+R+L +C G
Sbjct: 354 LCSEEPSLAAE-GTGYAQRAINNAQGMDEHLKGVGLRMLGLCLG 396
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,293,111
Number of Sequences: 28952
Number of extensions: 255311
Number of successful extensions: 610
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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