Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20c14
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   4.6  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   6.1  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   6.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 73  PWKGNYSNNSRFTLKFIP 126
           P +GN   N+++ LKF P
Sbjct: 871 PLEGNLMINNKYALKFFP 888


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 636 YNFIIFHTFFSLVCLDVLFQDSIHFSTKYSLVV*YN*D 523
           YN   F TF+       L  +S  F+T +S+ V Y  D
Sbjct: 116 YNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 636 YNFIIFHTFFSLVCLDVLFQDSIHFSTKYSLVV*YN*D 523
           YN   F TF+       L  +S  F+T +S+ V Y  D
Sbjct: 116 YNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 504 VYLFFASLPL*ISF 463
           +YL FA+LPL +SF
Sbjct: 140 LYLLFATLPLRLSF 153


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +3

Query: 264 PIRCHPTPPS-CQNPEKCLKKTTS 332
           PI CH TP S  + P K L    S
Sbjct: 657 PISCHTTPDSFIEAPNKTLPSLPS 680


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +2

Query: 77  GKETIVTIHDLP*NLYLWCKILKSAEYLGP 166
           G+  ++ ++++P +  + C+I    E+L P
Sbjct: 44  GQTPLIKLNNIPKSYGIKCEIYAKCEFLNP 73


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 198 LLNAAIMSPIAHPPCTPSAS 257
           LLNA +   +   PCTP A+
Sbjct: 42  LLNAYVNCLLDQGPCTPDAA 61


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 198 LLNAAIMSPIAHPPCTPSAS 257
           LLNA +   +   PCTP A+
Sbjct: 42  LLNAYVNCLLDQGPCTPDAA 61


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +3

Query: 192 QVLLNAAIMSPIAHPPCTPSASCTPIRCHPTPPSCQNPEKCL 317
           Q     +I   I + PCT +  C+ +R +         +KC+
Sbjct: 39  QGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCI 80


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 210 AIMSPIAHPPCTPSASCTPIRCHPTPPSCQNPEKCL 317
           +I   I + PCT +  C+ +R +         +KC+
Sbjct: 94  SIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCI 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,117
Number of Sequences: 438
Number of extensions: 3728
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)