Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20b15
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   0.96 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   0.96 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   0.96 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.9  
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    21   5.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    20   9.0  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    20   9.0  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    20   9.0  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    20   9.0  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    20   9.0  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    20   9.0  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    20   9.0  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   9.0  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   9.0  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   9.0  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   9.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   9.0  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   9.0  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    20   9.0  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   9.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 221 WFTGNILEMCKNW*TQIPLCCSLLYIN 301
           W  G  + +CK W T   LCC+   +N
Sbjct: 102 WIFG--IHLCKLWLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 221 WFTGNILEMCKNW*TQIPLCCSLLYIN 301
           W  G  + +CK W T   LCC+   +N
Sbjct: 102 WIFG--IHLCKLWLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 221 WFTGNILEMCKNW*TQIPLCCSLLYIN 301
           W  G  + +CK W T   LCC+   +N
Sbjct: 102 WIFG--IHLCKLWLTCDVLCCTASILN 126


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 241 GNVQELVNANPPMLQSVVY*WPFQYCSSHKI 333
           G++ +L   NP + +SV+Y        SH++
Sbjct: 669 GSLGKLTETNPKLARSVLYKIYLNTMESHEV 699


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 42

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 310 QYCSSHKIVTKCGLKC**FI 369
           QYC  HKI+ K   KC  FI
Sbjct: 20  QYCLHHKILIKKN-KCNAFI 38


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 91  PVPVYYGNFPPRPIMVRPWV 110


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 324 PVPVYYGNFPPRPIMVRPWV 343


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/20 (25%), Positives = 12/20 (60%)
 Frame = -3

Query: 259 PILAHFQNVPSKPVLFRSMI 200
           P+  ++ N P +P++ R  +
Sbjct: 340 PVPVYYGNFPPRPIMVRPWV 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,525
Number of Sequences: 438
Number of extensions: 2032
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)