Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20b14
(578 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein. 145 3e-35
BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p pro... 145 3e-35
AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC... 145 3e-35
AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB... 145 3e-35
AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA... 145 3e-35
>U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein.
Length = 1113
Score = 145 bits (352), Expect = 3e-35
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Frame = +2
Query: 56 VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 223
+CD + L + L + +L Q+L CDW+LE R +WE P
Sbjct: 911 LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970
Query: 224 HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 403
+ L FQ DL+SLR + +++P SR++L AVCR+MAGA+P TQQLLD SLR R
Sbjct: 971 GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030
Query: 404 ASIICGKE--RALEXXXXXXXRAVXLYMACKHLPAAVLAAPGERAGMLAQAAATLQKIG 574
+SI CG + R RA +Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVG 1089
>BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p protein.
Length = 1113
Score = 145 bits (352), Expect = 3e-35
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Frame = +2
Query: 56 VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 223
+CD + L + L + +L Q+L CDW+LE R +WE P
Sbjct: 911 LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970
Query: 224 HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 403
+ L FQ DL+SLR + +++P SR++L AVCR+MAGA+P TQQLLD SLR R
Sbjct: 971 GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030
Query: 404 ASIICGKE--RALEXXXXXXXRAVXLYMACKHLPAAVLAAPGERAGMLAQAAATLQKIG 574
+SI CG + R RA +Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVG 1089
>AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC,
isoform C protein.
Length = 1113
Score = 145 bits (352), Expect = 3e-35
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Frame = +2
Query: 56 VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 223
+CD + L + L + +L Q+L CDW+LE R +WE P
Sbjct: 911 LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970
Query: 224 HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 403
+ L FQ DL+SLR + +++P SR++L AVCR+MAGA+P TQQLLD SLR R
Sbjct: 971 GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030
Query: 404 ASIICGKE--RALEXXXXXXXRAVXLYMACKHLPAAVLAAPGERAGMLAQAAATLQKIG 574
+SI CG + R RA +Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVG 1089
>AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB,
isoform B protein.
Length = 1113
Score = 145 bits (352), Expect = 3e-35
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Frame = +2
Query: 56 VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 223
+CD + L + L + +L Q+L CDW+LE R +WE P
Sbjct: 911 LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970
Query: 224 HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 403
+ L FQ DL+SLR + +++P SR++L AVCR+MAGA+P TQQLLD SLR R
Sbjct: 971 GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030
Query: 404 ASIICGKE--RALEXXXXXXXRAVXLYMACKHLPAAVLAAPGERAGMLAQAAATLQKIG 574
+SI CG + R RA +Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVG 1089
>AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA,
isoform A protein.
Length = 1113
Score = 145 bits (352), Expect = 3e-35
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Frame = +2
Query: 56 VCDLAGARLADSLAYYCCRKPTQLMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----P 223
+CD + L + L + +L Q+L CDW+LE R +WE P
Sbjct: 911 LCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVP 970
Query: 224 HQQLRAFQRDLHSLRRLSQSLPWVTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNR 403
+ L FQ DL+SLR + +++P SR++L AVCR+MAGA+P TQQLLD SLR R
Sbjct: 971 GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAH 1030
Query: 404 ASIICGKE--RALEXXXXXXXRAVXLYMACKHLPAAVLAAPGERAGMLAQAAATLQKIG 574
+SI CG + R RA +Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G
Sbjct: 1031 SSIFCGSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVG 1089
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,807,822
Number of Sequences: 53049
Number of extensions: 503056
Number of successful extensions: 1924
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -