Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20b03
         (668 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated pro...    31   2.8  
BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated p...    31   2.8  
AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein comp...    31   2.8  

>U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated protein
            TP-1 protein.
          Length = 2627

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 572  SPALSLGLTADQTKMAVGYGDSSIKVYDMET 664
            SPALS+ L+ D  ++AVGY    I++Y + +
Sbjct: 1928 SPALSVALSPDGDRVAVGYRADGIRIYKISS 1958


>BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated
            protein 1 protein.
          Length = 2627

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 572  SPALSLGLTADQTKMAVGYGDSSIKVYDMET 664
            SPALS+ L+ D  ++AVGY    I++Y + +
Sbjct: 1928 SPALSVALSPDGDRVAVGYRADGIRIYKISS 1958


>AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein component
            1 variant protein.
          Length = 1903

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 572  SPALSLGLTADQTKMAVGYGDSSIKVYDMET 664
            SPALS+ L+ D  ++AVGY    I++Y + +
Sbjct: 1270 SPALSVALSPDGDRVAVGYRADGIRIYKISS 1300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,730,563
Number of Sequences: 237096
Number of extensions: 2078327
Number of successful extensions: 3986
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3986
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)