Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20b03
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine re...    31   0.98 
Z68315-3|CAA92670.1|  430|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical ...    30   1.7  
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z30423-3|CAA83005.2|  456|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AL117206-3|CAB60451.1|  265|Caenorhabditis elegans Hypothetical ...    28   5.2  
AF039050-4|AAC47937.1|  499|Caenorhabditis elegans Cytochrome p4...    28   5.2  
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    28   6.9  
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    28   6.9  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z75543-6|CAA99873.3|  499|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z75529-2|CAA99783.1|  755|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine
           receptor, class h protein128 protein.
          Length = 337

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 434 FRSCKLHRPYKQRSKLFLRPCCIQWR 357
           F +  +H+PY++  K+FL P C+ WR
Sbjct: 293 FTTLAVHKPYRESLKVFL-PTCMTWR 317


>Z68315-3|CAA92670.1|  430|Caenorhabditis elegans Hypothetical
           protein F28C6.3 protein.
          Length = 430

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 539 SSYSTPFIT-QRSPALSLGLTADQTKMAVGYGDSSIKVYDME 661
           S Y T ++T  ++P  +    +D + +A G  D SIK+ D+E
Sbjct: 98  SEYETIYLTVHKAPCRAAAFNSDGSLVATGSADCSIKIMDVE 139


>AF039040-4|AAB94182.1|  368|Caenorhabditis elegans Hypothetical
           protein T22B11.2 protein.
          Length = 368

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 47  YHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKG 166
           YH   +  P  +Y LF KTRL    +Y ++  +F  + KG
Sbjct: 143 YHTVFDGLPESYYKLFWKTRLALLYIYKYVSKDFDWYFKG 182


>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
           protein C26C6.1a protein.
          Length = 1883

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 50  HYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKGTANNITY 187
           +Y+  + P+    + HK ++ E   Y    D+F  F+K   NN+TY
Sbjct: 81  YYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIK---NNLTY 123


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
           protein C26C6.1a protein.
          Length = 1883

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 50  HYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKGTANNITY 187
           +Y+  + P+    + HK ++ E   Y    D+F  F+K   NN+TY
Sbjct: 81  YYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIK---NNLTY 123


>Z30423-3|CAA83005.2|  456|Caenorhabditis elegans Hypothetical
           protein T20G5.4 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 196 VLHGKWLYYDSTVFSKRISCYCRTFIRLNSDAPR*YR 306
           VL   W  YD   F   I+C   T+IR +S+  + YR
Sbjct: 89  VLRRFWYLYDIIGFIDNIACSTATYIRGDSERAKQYR 125


>AL117206-3|CAB60451.1|  265|Caenorhabditis elegans Hypothetical
           protein Y67A10A.5 protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = +3

Query: 21  FRNTLKTLNII-----IKMKKIP*FGIHFFIKRD*KKRKSTLGFKIILLN 155
           FRN +KTL ++     + ++ IP F  HF+IK D   R + +G + +LLN
Sbjct: 156 FRN-VKTLKLLGDYGSLSIETIPYF-THFYIKVDFFTRDNAIGIRDVLLN 203


>AF039050-4|AAC47937.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A7 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 413 GAIYRIEIPNVVAPIEEPPLFCIR 484
           GAI +IE P   +P++ PP++ IR
Sbjct: 470 GAIPKIESPTPFSPVKRPPVYDIR 493


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24b protein.
          Length = 1127

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +2

Query: 425 RIEIPNVVAPIEEPPLFCIRADPALESFNM--QFYGSPGISSYSTPFITQRSPALSLGLT 598
           R+  PN+   +  P +F +R+D   ++ ++  + +GS   S +S  F  + +  L  G  
Sbjct: 94  RVSFPNISPKLASPTIFAMRSDAESDTLSLSPRSFGSGKTSDFSAWFSRKLNGILGDGKA 153

Query: 599 ADQTKMAV 622
           +  +  +V
Sbjct: 154 SPDSTSSV 161


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
           protein Y105E8A.24a protein.
          Length = 1161

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +2

Query: 425 RIEIPNVVAPIEEPPLFCIRADPALESFNM--QFYGSPGISSYSTPFITQRSPALSLGLT 598
           R+  PN+   +  P +F +R+D   ++ ++  + +GS   S +S  F  + +  L  G  
Sbjct: 94  RVSFPNISPKLASPTIFAMRSDAESDTLSLSPRSFGSGKTSDFSAWFSRKLNGILGDGKA 153

Query: 599 ADQTKMAV 622
           +  +  +V
Sbjct: 154 SPDSTSSV 161


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
            protein Y47D3B.7 protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 372  AWSKKEFATLLVWTVQFTG-SKYPTLWRQ*RNLHYSVL 482
            AW    FA+   WT  F G S + TL+++  N HY+++
Sbjct: 1005 AWRSNLFASKPYWTQSFKGQSTFSTLYQEAYN-HYAII 1041


>Z75543-6|CAA99873.3|  499|Caenorhabditis elegans Hypothetical
           protein K01D12.6 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 491 PALESF---NMQFYGSPGISSYSTPFITQRSPALSLGLTADQTKMAV 622
           P +E F   NM+FY   G S Y+    T RS  LS+ L+ D  + AV
Sbjct: 171 PQMEDFRDDNMEFYSVSGGSGYAGSVRTGRSRTLSV-LSDDSFRSAV 216


>Z75529-2|CAA99783.1|  755|Caenorhabditis elegans Hypothetical
           protein C44H9.2 protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/95 (20%), Positives = 39/95 (41%)
 Frame = +2

Query: 320 TLRNVQFPPKPVYAIEYSMVEERVCYAACMDGAIYRIEIPNVVAPIEEPPLFCIRADPAL 499
           T   +Q   K +Y    +M +E++     +  A + I  P+V+    +     ++ D   
Sbjct: 625 TPEKLQGEAKTIYENMETMHKEQIPLLEILIEAFFVIYNPDVIVSTADSYKCLVKLDILK 684

Query: 500 ESFNMQFYGSPGISSYSTPFITQRSPALSLGLTAD 604
              N+Q   +  +  Y+  ++ Q+ P    GL  D
Sbjct: 685 HVSNIQIDEASQLPEYTLIYLLQKFPNSGFGLVGD 719


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,048,700
Number of Sequences: 27780
Number of extensions: 323238
Number of successful extensions: 804
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)