Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20b02
         (407 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CD8C3 Cluster: hypothetical protein TTHERM_0052...    32   5.1  
UniRef50_Q54B09 Cluster: Putative uncharacterized protein; n=1; ...    31   6.8  
UniRef50_Q6C579 Cluster: Similar to tr|Q9Y7F3 Neurospora crassa ...    31   6.8  
UniRef50_Q6AZ36 Cluster: Cgrrf1 protein; n=1; Rattus norvegicus|...    31   8.9  
UniRef50_A6TQ71 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  
UniRef50_Q64XV0 Cluster: tRNA pseudouridine synthase A; n=16; Ba...    31   8.9  
UniRef50_Q99675 Cluster: Cell growth regulator with RING finger ...    31   8.9  

>UniRef50_UPI00006CD8C3 Cluster: hypothetical protein
           TTHERM_00522450; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00522450 - Tetrahymena
           thermophila SB210
          Length = 1570

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 20/75 (26%), Positives = 37/75 (49%)
 Frame = +3

Query: 96  ELTFYYVMSIWLYLFPIAVAVVMFLLIGTICERRIEATFHHIMELRQAQIQRNEENVENV 275
           ELT  Y +SIW+Y+F   +   + L   ++C   + A +H +   ++++I+ N +    V
Sbjct: 295 ELTINYALSIWVYIFMYMICGSVSLT--SVC---VFAGYHLLFRRQKSKIKTNIKQCLKV 349

Query: 276 HAISACTGTCQPITP 320
               A  G   P+ P
Sbjct: 350 FYPGALFGIYLPMIP 364


>UniRef50_Q54B09 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 975

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 275 NVFNIFFIPLYLCLTKFHDMMKGSF 201
           NVFN++F P++ CL  F + + G F
Sbjct: 481 NVFNLYFPPIFKCLAWFPNSLSGEF 505


>UniRef50_Q6C579 Cluster: Similar to tr|Q9Y7F3 Neurospora crassa
           S-adenosylmethionine decarboxylase; n=1; Yarrowia
           lipolytica|Rep: Similar to tr|Q9Y7F3 Neurospora crassa
           S-adenosylmethionine decarboxylase - Yarrowia lipolytica
           (Candida lipolytica)
          Length = 418

 Score = 31.5 bits (68), Expect = 6.8
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +1

Query: 244 YRGMKKMLKT-FTPSRPVLELANRSLRNVRTTQKQTL 351
           + G +K+L+  F P++  LE  N+SLRNV T Q + L
Sbjct: 21  FEGPEKLLEVWFAPNQESLEGTNKSLRNVSTAQWEQL 57


>UniRef50_Q6AZ36 Cluster: Cgrrf1 protein; n=1; Rattus
           norvegicus|Rep: Cgrrf1 protein - Rattus norvegicus (Rat)
          Length = 185

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
 Frame = -2

Query: 379 IYYYSCIFYVAFVFVLF-VRCGVI----GWQVPV 293
           +Y YS +FY+A VF  F V  G++    GW VPV
Sbjct: 9   LYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPV 42


>UniRef50_A6TQ71 Cluster: Putative uncharacterized protein; n=1;
           Alkaliphilus metalliredigens QYMF|Rep: Putative
           uncharacterized protein - Alkaliphilus metalliredigens
           QYMF
          Length = 359

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/52 (28%), Positives = 34/52 (65%)
 Frame = +3

Query: 114 VMSIWLYLFPIAVAVVMFLLIGTICERRIEATFHHIMELRQAQIQRNEENVE 269
           V  + LY+F I + + +F++IG I +R++++   + M +  ++IQR+  N++
Sbjct: 68  VSILLLYVFLIFIMISLFIIIGPILQRQLQSLTDN-MPVIISEIQRSVINIQ 118


>UniRef50_Q64XV0 Cluster: tRNA pseudouridine synthase A; n=16;
           Bacteroidetes|Rep: tRNA pseudouridine synthase A -
           Bacteroides fragilis
          Length = 252

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 164 HDHSHRNGKQIQPNGHNIVEC*LK 93
           +D +H +G QIQPNG +I EC +K
Sbjct: 12  YDGTHYHGWQIQPNGISIQECLMK 35


>UniRef50_Q99675 Cluster: Cell growth regulator with RING finger
           domain protein 1; n=20; Tetrapoda|Rep: Cell growth
           regulator with RING finger domain protein 1 - Homo
           sapiens (Human)
          Length = 332

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
 Frame = -2

Query: 379 IYYYSCIFYVAFVFVLF-VRCGVI----GWQVPV 293
           +Y YS +FY+A VF  F V  G++    GW VPV
Sbjct: 9   LYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPV 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,335,998
Number of Sequences: 1657284
Number of extensions: 7244489
Number of successful extensions: 18758
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18751
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)