Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20b02
         (407 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4254|AAS65221.1|  254|Drosophila melanogaster CG33346-P...    30   1.0  
BT003552-1|AAO39556.1|  676|Drosophila melanogaster LP12382p pro...    28   4.1  
AE014298-3127|AAF50824.2|  696|Drosophila melanogaster CG1410-PA...    28   4.1  
AF017777-7|AAC28402.1|  679|Drosophila melanogaster waclaw protein.    28   5.4  

>AE014297-4254|AAS65221.1|  254|Drosophila melanogaster CG33346-PA
           protein.
          Length = 254

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 220 SWNFVKHKYRGMKKMLKTFTPSRPVLELANRSLRNV 327
           +W  V++  RG K +L   T +  VL+L NRS ++V
Sbjct: 127 NWKIVENWVRGQKDVLNVCTGALGVLDLLNRSQKSV 162


>BT003552-1|AAO39556.1|  676|Drosophila melanogaster LP12382p
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 308 LASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMK--GSFYPPFTYGAD*EEHDH--SHRNG 141
           L  SS   D   V   + +PL   +  FHD +K   S Y  F+Y    E+H +  SH   
Sbjct: 509 LQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSY----EDHGYHPSHLVR 564

Query: 140 KQIQPNGHNIVEC*LKITSSSRFSG 66
             I  NG  + E   +I   S+ +G
Sbjct: 565 LDIHLNGKPVEEL-CRIVHVSKATG 588


>AE014298-3127|AAF50824.2|  696|Drosophila melanogaster CG1410-PA,
           isoform A protein.
          Length = 696

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 308 LASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMK--GSFYPPFTYGAD*EEHDH--SHRNG 141
           L  SS   D   V   + +PL   +  FHD +K   S Y  F+Y    E+H +  SH   
Sbjct: 529 LQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSY----EDHGYHPSHLVR 584

Query: 140 KQIQPNGHNIVEC*LKITSSSRFSG 66
             I  NG  + E   +I   S+ +G
Sbjct: 585 LDIHLNGKPVEEL-CRIVHVSKATG 608


>AF017777-7|AAC28402.1|  679|Drosophila melanogaster waclaw protein.
          Length = 679

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -1

Query: 308 LASSSTGRDGVNVFNIFFIPLYLCLTKFHDMMK--GSFYPPFTYGAD*EEHDH--SHRNG 141
           L  SS   D   V   + +PL   +  FHD +K   S Y  F+Y    E+H +  SH   
Sbjct: 529 LQQSSVNIDETRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSY----EDHGYHPSHLVR 584

Query: 140 KQIQPNGHNIVEC*LKITSSSRFSG 66
             I  NG  + E   +I   S+ +G
Sbjct: 585 LDIHLNGKPVEEL-CRIVHVSKATG 608


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,715,957
Number of Sequences: 53049
Number of extensions: 357569
Number of successful extensions: 1200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)