Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20a12
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 30 0.35
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.4
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 27 3.3
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 3.3
SPAC2F7.02c |||phosphoprotein phosphatase|Schizosaccharomyces po... 26 4.3
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 5.7
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.7
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.7
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 5.7
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 7.5
SPBC1347.14c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 25 7.5
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 7.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.9
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 9.9
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 29.9 bits (64), Expect = 0.35
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 193 LHQNEFISWCFKFIKPTTKPN*KIAKIFFPPPLN 294
LH+ +F C+++++ N A++FF P L+
Sbjct: 72 LHEQDFYDLCYQYLRKAASQNVVYAEMFFDPQLH 105
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 227 LKHQLMNSFWCKQVDGNTKRNSLYTFLA 144
L+H + NSF +DG+T N FLA
Sbjct: 246 LRHAINNSFNSISIDGDTSTNDTIAFLA 273
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 26.6 bits (56), Expect = 3.3
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +2
Query: 347 FINNTKPDIIEQFSKMMTDEEKS--KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDS 520
FI+N +P + K + K+ K+ + VK +R REK K S
Sbjct: 785 FISNVRPKLFAYPPKSVQPTAKTVQKVETAVLSTTVKAQARAKRAE------REKASKGS 838
Query: 521 NEDEDKVE--SVDETYENPYIVDKSQ 592
N+DE K++ + +E P +D+ +
Sbjct: 839 NDDEMKIDKKTTEEKEATPMEMDEEK 864
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 26.6 bits (56), Expect = 3.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -2
Query: 605 YFFQVVIYQLCMDFHTFRQRIRL 537
Y ++++++CM F T +RIR+
Sbjct: 847 YSLGIILFEMCMTFSTSMERIRI 869
>SPAC2F7.02c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 560 YENPYIVDKSQLGRNRKETGTID 628
YE ++ D SQLGRN +++ ID
Sbjct: 251 YEGNFVKDLSQLGRNLEDSIIID 273
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 488 KDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRK 610
K++R+ K + +DE + VD +++P+ DK N+K
Sbjct: 490 KELRQL--KKTKDDEGEGSDVDLGFDDPFFKDKDASRNNKK 528
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 416 KIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETY 562
K+ LLH++ VK+ LPE L+K + + E+K +S+ T+
Sbjct: 420 KLRLLLHELLVKKKALPELDKDLLKFVWVVDFPLFSPTEEKNQSITSTH 468
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.8 bits (54), Expect = 5.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 401 DEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIV 580
D K+ ++K H A E Q G ++ E+ D +EDED+ E D N +++
Sbjct: 178 DTSKNGLSKKQHSEAQPEVQ------GNDDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLL 231
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 449 KENQLPERCSGLVKDIREKFGKDSNEDEDKVES 547
KE++ + L KD+ EK K +NED K E+
Sbjct: 424 KESKDENNKASLHKDVEEKDTKITNEDTGKTET 456
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 353 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNED 529
N P I+ +K + KS + D + + P C G K + +KFG D + +
Sbjct: 320 NYHNPSILLIKAKKINANHKSSSRPISLDATIPR-KYPPHCIGTDKAVPQKFGADFHNE 377
>SPBC1347.14c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 25.4 bits (53), Expect = 7.5
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -2
Query: 626 QWFQFPFYFFQVVIYQL 576
Q+F FPFY+F ++I ++
Sbjct: 13 QFFVFPFYYFLLIITEI 29
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.4 bits (53), Expect = 7.5
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 353 NNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDE 532
N KPD+I K D S+ KL+ A E Q L+KD ++NE
Sbjct: 917 NGAKPDVIGASGKKPIDLSSSEPIKLVFKEANNE-QAQSISRSLIKDSEGSI--NTNETL 973
Query: 533 DKVESVDETYEN 568
+ V+E E+
Sbjct: 974 ESTSIVNEIEES 985
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 368 DIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPE 469
D+IE+F K+ + E+ ++ L+ +K L E
Sbjct: 1264 DLIEKFEKLSSSEKNDNLSNLIERQIIKYRSLFE 1297
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = +2
Query: 482 LVKDIREKFGKDSNED------EDKVESVDETYENPYIVDKSQ 592
L++ REKFGKD ++ K +D T E P+ V +++
Sbjct: 33 LIEWFREKFGKDISQPSVSQILSSKYSYLDNTVEKPWDVKRNR 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,884,449
Number of Sequences: 5004
Number of extensions: 63983
Number of successful extensions: 204
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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