Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20a12
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical pr... 35 0.061
Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical pr... 31 0.75
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 31 0.99
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 31 0.99
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 30 1.3
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 30 1.3
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 30 1.7
Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 29 4.0
L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 29 4.0
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 29 4.0
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 28 5.3
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 5.3
AC024201-7|AAF36018.2| 321|Caenorhabditis elegans Hypothetical ... 28 5.3
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 28 6.9
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 27 9.2
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.2
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 27 9.2
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 27 9.2
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 27 9.2
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 27 9.2
>Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical
protein K11H3.5 protein.
Length = 107
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 407 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 568
EK KIAK+L + K Q+ E L++ + E D E E+K+E + +Y N
Sbjct: 29 EKHKIAKMLQNEQ-KSLQMLEEEQALLEKVVETLSNDIEEKEEKIEKLRRSYTN 81
>Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical
protein T03F7.6 protein.
Length = 237
Score = 31.1 bits (67), Expect = 0.75
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 103 IILFLVTVCCIFGYARNVYREFLFVLPSTCLHQNEFISWCFKFIKPTTKPN*KIAKI 273
I LFL C IFG +Y FVL +T L+ + + F+ +TK KIAKI
Sbjct: 140 ISLFLSFWCLIFGIIPFIYLSEYFVLANTTLNLTATV-FPILFLAGSTKIRKKIAKI 195
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 395 MTDEEKSKIAKLLHDVAVKENQL-PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 571
+T E+K K + +N+L PE ++ D EKF +D + +DK E+ +E
Sbjct: 516 VTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDA-EKFAEDDKKVKDKAEARNELESYA 574
Query: 572 YIVDKSQLGRNRKETGTID 628
Y + K+Q+ K G +D
Sbjct: 575 YNL-KNQIEDKEKLGGKLD 592
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 377 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 553
E M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIEAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 554 ETYE 565
E E
Sbjct: 601 EAVE 604
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 30.7 bits (66), Expect = 0.99
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +2
Query: 257 KKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLH 436
+K +K+ +D+ M + K + F N + EQ +K T +K K+AK
Sbjct: 23 EKAKKAIVEIERLDILAKKEMEVAKKHKIEFFANYEEMTAEQKTKAFTFMQK-KMAK--- 78
Query: 437 DVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 571
V+ +Q E SGL +++ +GK E++ +E++++ + P
Sbjct: 79 -VSEYSDQKIEIASGLKVLLKDVYGKFMEEEQKFIENLNKIPKAP 122
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +2
Query: 323 MVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIRE 502
MV ++ T+ + E+ K TD+EK K + A+ E +L ER L KD++
Sbjct: 178 MVEPSSAPTTEETETENEEEDDKEKTDKEKLDAEK---EKALAEKRL-EREQKLYKDLKS 233
Query: 503 KFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRK 610
S+ +DK+ DE ++D + ++RK
Sbjct: 234 SSDDTSSSIDDKMNFDDEIEYLEEMLDNIEKQKDRK 269
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +2
Query: 323 MVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIRE 502
MV ++ T+ + E+ K TD+EK K + A+ E +L ER L KD++
Sbjct: 178 MVEPSSAPTTEETETENEEEDDKEKTDKEKLDAEK---EKALAEKRL-EREQKLYKDLKS 233
Query: 503 KFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRK 610
S+ +DK+ DE ++D + ++RK
Sbjct: 234 SSDDTSSSIDDKMNFDDEIEYLEEMLDNIEKQKDRK 269
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 395 MTDEEKSKIAKLLHDVAVKENQL-PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 571
+T E+K K + +N+L PE ++ D EKF +D + +DK E+ +E
Sbjct: 516 VTAEDKGTGNKNKITITNDQNRLSPEDIERMINDA-EKFAEDDKKVKDKAEARNELESYA 574
Query: 572 YIVDKSQLGRNRKETGTID 628
Y + K+Q+ K G +D
Sbjct: 575 YNL-KNQIEDKEKLGGKLD 592
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 377 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 553
E +M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 554 ETYE 565
E E
Sbjct: 601 EAVE 604
>Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 395 MTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPY 574
+T KSK + K+ + E+ G KD +E K E ED+ +DE ++
Sbjct: 88 LTPNSKSKKKTENQETKEKDEEAEEKKDGPPKDDKELKMKKEKEQEDENAELDEQKKDGD 147
Query: 575 IVDKSQLGRNRKETG 619
++ + + R TG
Sbjct: 148 LLGRGPVHNVRVATG 162
>AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 395 MTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPY 574
+T KSK + K+ + E+ G KD +E K E ED+ +DE ++
Sbjct: 88 LTPNSKSKKKTENQETKEKDEEAEEKKDGPPKDDKELKMKKEKEQEDENAELDEQKKDGD 147
Query: 575 IVDKSQLGRNRKETG 619
++ + + R TG
Sbjct: 148 LLGRGPVHNVRVATG 162
>Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical
protein F59D12.3 protein.
Length = 356
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 494 IREKFGKDSNEDEDKVESVDETYENPYIVDKSQ 592
IREK GK+ D + + + YEN Y + K Q
Sbjct: 318 IREKIGKEMRSDPEAMRLLHLIYENDYRIFKLQ 350
>L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical
protein F10E9.4 protein.
Length = 262
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 410 KSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVE 544
K + K++ +KE + E + D++EK ++ +EDED E
Sbjct: 218 KGEYVKMIEKAEIKEEEEVEDEADEETDVKEKVKEEEDEDEDMEE 262
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 377 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 556
E +M D+EK +++ K+ + +D+ K +E E +VESVD
Sbjct: 29 ESLKRMEVDDEKEPEEEIVEKTEEKQEE---------EDVTVKL---EDETETEVESVDG 76
Query: 557 TYENPYIVDKSQLGRNRKETGT 622
E +VD+ Q+ R T T
Sbjct: 77 GQEEKEVVDEKQVDAERVNTKT 98
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 377 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 556
E +M D+EK +++ K+ + +D+ K +E E +VESVD
Sbjct: 29 ESLKRMEVDDEKEPEEEIVEKTEEKQEE---------EDVTVKL---EDETETEVESVDG 76
Query: 557 TYENPYIVDKSQLGRNRKETGT 622
E +VD+ Q+ R T T
Sbjct: 77 GQEEKEVVDEKQVDAERVNTKT 98
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = +2
Query: 458 QLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 556
++ ERC G + + EKF + +E + ++E++++
Sbjct: 313 EMEERCRGRIAAMEEKFRMERHEMQKEIENIEK 345
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +2
Query: 362 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGK--DS-NEDE 532
KP+++E+ + +E+K K+ + + KE + + DS EDE
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPDSPEEDE 108
Query: 533 DKVESVDETYENPYIVDKSQ 592
D V V+ T +P SQ
Sbjct: 109 DAVPVVNRTTTSPPTSPPSQ 128
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +2
Query: 197 TKMNSLVGASNL*NQPPNQIKKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDII 376
+K+N L P ++KL+ +P L++ S+ +++ ++
Sbjct: 306 SKLNKYYEPEKLFTSLPKCVEKLKALKTQPDFDKLSIIDSVVNTFHENARELHDKMSNVH 365
Query: 377 EQFSKMMTDEEKSKIAKLL 433
+FSK+ TDEE KI +L
Sbjct: 366 GEFSKVYTDEEAKKIHNIL 384
>AC024201-7|AAF36018.2| 321|Caenorhabditis elegans Hypothetical
protein Y71F9B.2 protein.
Length = 321
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 579 LINHNLEEIERKLEPLMSKNKRNSVASP 662
++ N EE+ R EPLM+ + R SV SP
Sbjct: 193 IVEGNYEELLRVYEPLMNDDARLSVMSP 220
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +2
Query: 362 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFG-----KDS-N 523
KP+++E+ + +E+K K+ + + KE + + KDS
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPNVKDSPE 108
Query: 524 EDEDKVESVDETYENPYIVDKSQ 592
EDED V V+ T +P SQ
Sbjct: 109 EDEDAVPVVNRTTTSPPTSPPSQ 131
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 429 SFAIFDFSSSVIIFENCSMMSGFVLFIKYTVALVTI 322
+F+I++FSS + S++ GF+ F + + LV I
Sbjct: 181 NFSIYEFSSKFLALIIFSILGGFLSFTVFILVLVNI 216
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +2
Query: 413 SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQ 592
+K+ +L+ ++ + +L E ++ R+K + +E E ++E + E E +Q
Sbjct: 1115 AKLQRLIKELTARNAELEEELEA-ERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQ 1173
Query: 593 LGRNRKETGTI 625
L N+K I
Sbjct: 1174 LEANKKREAEI 1184
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 491 DIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRKE 613
D E G D + D + +DE YE+ Y KS KE
Sbjct: 68 DQMELLGDDESSDTEDQNDLDEEYEDYYTDSKSTRRETTKE 108
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 491 DIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRKE 613
D E G D + D + +DE YE+ Y KS KE
Sbjct: 68 DQMELLGDDESSDTEDQNDLDEEYEDYYTDSKSTRRETTKE 108
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +2
Query: 413 SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQ 592
+K+ +L+ ++ + +L E ++ R+K + +E E ++E + E E +Q
Sbjct: 1115 AKLQRLIKELTARNAELEEELEA-ERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQ 1173
Query: 593 LGRNRKETGTI 625
L N+K I
Sbjct: 1174 LEANKKREAEI 1184
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 308 GASMPMVTKATVYFINNTKPDIIEQFSKMMT--DEEKSKIAKLLHDVAVKENQLPERCSG 481
GA + V +A+ + + +I+E+ K+ +E K K K K+++ E
Sbjct: 36 GAELDRVKRASDHKLEKKLDEIMEKVEKIKDKIEENKEKREKKNKKKGNKKDEDEEEEED 95
Query: 482 LVKDIREKF-GKDSNEDEDKVESVDETYENPYIVDKSQLGRNRK 610
K ++K KDS E+EDK + D+ +N + + + RK
Sbjct: 96 KDKKKKDKKKNKDSEEEEDKKK--DKKKKNDSSDESEEENKKRK 137
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 491 DIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRKE 613
D E G D + D + +DE YE+ Y KS KE
Sbjct: 68 DQMELLGDDESSDTEDQNDLDEEYEDYYTDSKSTRRETTKE 108
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 ENQLPERCSGLVKD-IREKFGKDSNEDEDKVESVDETYEN 568
E++L +R GL D E G+D EDED+ E E E+
Sbjct: 710 EDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDLED 749
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 491 DIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLGRNRKE 613
D E G D + D + +DE YE+ Y KS KE
Sbjct: 30 DQMELLGDDESSDTEDQNDLDEEYEDYYTDSKSTRRETTKE 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,787,460
Number of Sequences: 27780
Number of extensions: 354065
Number of successful extensions: 1096
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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