Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20a08
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical ... 190 7e-49
Z46937-7|CAH10806.1| 109|Caenorhabditis elegans Hypothetical pr... 134 5e-32
U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81129-1|CAB03408.1| 350|Caenorhabditis elegans Hypothetical pr... 28 5.9
U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical pr... 27 7.8
U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical pr... 27 7.8
U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical pr... 27 7.8
>AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical
protein Y54G11A.2 protein.
Length = 210
Score = 190 bits (463), Expect = 7e-49
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +2
Query: 65 MVFYFTSSVVSPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTID 244
MV F+S+ +PP ++MG DK ENEDLIK+GWPEDVWFHVDK+SSAHVYLRL G TID
Sbjct: 1 MVIKFSSNTTNPPTMIYMGVDKVENEDLIKYGWPEDVWFHVDKLSSAHVYLRLHSGMTID 60
Query: 245 DIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAK 424
IP +L D CQLVK NSI G K+N++ IVYTMWSNLKKT M VGQV FH ++V+
Sbjct: 61 SIPEALLIDCCQLVKQNSIEGCKLNNVAIVYTMWSNLKKTGDMAVGQVGFHSHKQVKHTV 120
Query: 425 VAKRNNEIVNRLNKTK 472
V + NEIVNRL KT+
Sbjct: 121 VPTKINEIVNRLEKTR 136
>Z46937-7|CAH10806.1| 109|Caenorhabditis elegans Hypothetical
protein F43C1.7 protein.
Length = 109
Score = 134 bits (324), Expect = 5e-32
Identities = 64/109 (58%), Positives = 78/109 (71%)
Frame = +2
Query: 65 MVFYFTSSVVSPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTID 244
MVF F SS V+PP +FMG + ENE L K G P DVWFHVDKVSSAHVYL+L G TID
Sbjct: 1 MVFGFISSTVTPPALIFMGEHQVENEKLFKCGDPGDVWFHVDKVSSAHVYLQLPSGITID 60
Query: 245 DIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVA 391
IP +L++ CQLVK NSI G KM +++ YT+ NLKK GM+ G+V+
Sbjct: 61 TIPEELLEECCQLVKKNSIQGVKMEKVEVNYTLKENLKKVKGMQTGEVS 109
>U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical
protein C54D2.6 protein.
Length = 224
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +2
Query: 164 PEDVWFHVDKVSSAHVYLRLTPGQTIDDIPNLVLDDACQLVKANSILGNKMNDIDIVYTM 343
PEDV F V+++ L P Q+I+++ + D +LVKANS L +K + ++ +
Sbjct: 27 PEDVGF-VERIIDQLEALP-DPPQSINNVLPAIQDFRNELVKANSFLISKTS--EVAESP 82
Query: 344 WSNLKKT----AGMEVGQVAF 394
+ K+T AG ++ Q+ F
Sbjct: 83 YQPFKETAAVFAGCQINQIKF 103
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 80 TSSVVSPPVTLFMGADKNENEDLIKWGWPEDV 175
TSS SP T+ GA + N DL GW + +
Sbjct: 355 TSSRKSPHTTMITGAQTSSNGDLFTVGWDDQL 386
>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical
protein F20G4.1 protein.
Length = 1615
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 335 YTMWSNLKKTAGMEVGQVAFHKDREVRKAK 424
YT+W++LKK GM +G+ A E AK
Sbjct: 415 YTVWNSLKKLVGMAMGEPAEQLHFETHIAK 444
>Z81129-1|CAB03408.1| 350|Caenorhabditis elegans Hypothetical
protein T23F1.3 protein.
Length = 350
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -1
Query: 491 GLEMILFLFYSAYLLFHYF--FWPLSPFLLLCLYGMLLVQPPFQQSSSNLTTLYKLCLCH 318
GL +++ F S ++ YF F P + + + G L+ P + +LY CL
Sbjct: 96 GLYLVIVAFISIQFIYRYFCFFTPKNMRMFKGIRGFCLIAYPLVPGAVYAGSLYLFCLPD 155
Query: 317 SFY 309
Y
Sbjct: 156 ELY 158
>U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical
protein C34F11.3a protein.
Length = 740
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 98 PPVTLFMGADKNENEDLIKWGWPEDVW 178
P ++++ G KNE ++L KW DVW
Sbjct: 416 PRLSIY-GRSKNEWDNLAKWALTHDVW 441
>U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical
protein C34F11.3c protein.
Length = 803
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 98 PPVTLFMGADKNENEDLIKWGWPEDVW 178
P ++++ G KNE ++L KW DVW
Sbjct: 479 PRLSIY-GRSKNEWDNLAKWALTHDVW 504
>U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical
protein C34F11.3b protein.
Length = 764
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 98 PPVTLFMGADKNENEDLIKWGWPEDVW 178
P ++++ G KNE ++L KW DVW
Sbjct: 440 PRLSIY-GRSKNEWDNLAKWALTHDVW 465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,908,213
Number of Sequences: 27780
Number of extensions: 253732
Number of successful extensions: 757
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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