BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1p14
(756 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.0
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 23 2.6
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 3.5
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 4.6
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 4.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 6.1
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 22 6.1
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 8.0
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.0
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 8.0
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 157 FIILLSHFLFEFKCYYFNYKSCLCLY 234
FII HFL +Y+ + LC+Y
Sbjct: 89 FIIFTVHFLLCTYYFYYAFIILLCVY 114
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 669 MFILWKGYVQQGILFICP 616
+F+L GY +LF CP
Sbjct: 71 LFLLCSGYFTVHLLFYCP 88
Score = 21.8 bits (44), Expect = 6.1
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 157 FIILLSHFLFEFKCYYFNYK--SCLCLY 234
FII H LF YYF LC+Y
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLCIY 299
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +1
Query: 157 FIILLSHFLFEFKCYYFNYK--SCLCLY 234
FII H LF YYF LC+Y
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIY 147
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 334 WNPGFEYQQSLTGY---VKGFSRRFWQGNTTHRGTEDKPGRV 450
+N ++Y Q+ + Y +GFS +++QG G D+ V
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCVGGKVDETAGV 272
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 502 PKTLYPKLFLPCPLLEWRRDP 440
P + YP + CP ++W P
Sbjct: 162 PSSSYPANEISCPQVQWSATP 182
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 645 HSPSRE*TLAWIGAFARYSETNTGMPW 725
H E TL W G + R S+ G+P+
Sbjct: 191 HIEGNEVTLHWHGVWQRGSQYYDGVPF 217
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 645 HSPSRE*TLAWIGAFARYSETNTGMPW 725
H E TL W G + R S+ G+P+
Sbjct: 191 HIEGNEVTLHWHGVWQRGSQYYDGVPF 217
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 6.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 324 TITKYPERFLVRFCF*FGTARFVS*LIHFCIQTQTAFIIEIV 199
T+ + + + RF FG + + F + TQT FII ++
Sbjct: 580 TLHHHLSKLVTRFNEIFGLGLLLMFGVSFLLITQTIFIICVI 621
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 121 SMYAR*NHLTRLFIILLSHFLFEFKCYYFNY 213
S+Y++ H + I ++ F E Y FNY
Sbjct: 50 SIYSKSFHRNEIHIKIVLMFFKEASLYCFNY 80
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 317 PNTQKGSLLDSVFDSELLVSFLNLSI 240
P+T + +LDSV E LV LN +
Sbjct: 491 PHTGRVEVLDSVEKLETLVHQLNTEV 516
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 677 PSQCLFSGRAMYSKASFLSALV 612
P +C+F+G+A + + F L+
Sbjct: 746 PQKCIFNGQAYFPGSRFHPFLI 767
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.4 bits (43), Expect = 8.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 78 FKSARYEYK*KKIFFNVCPLKSFNSSFYHF 167
F + YE K+ FN C KSF +F F
Sbjct: 92 FFNQGYELS-KQEIFNCCSKKSFRMNFAIF 120
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,927
Number of Sequences: 336
Number of extensions: 4759
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -