Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1p14
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27799| Best HMM Match : ChaC (HMM E-Value=0) 116 2e-26
SB_24978| Best HMM Match : ChaC (HMM E-Value=0) 108 5e-24
SB_29775| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_14134| Best HMM Match : Hormone_3 (HMM E-Value=2.3) 31 1.0
SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_35| Best HMM Match : zf-U1 (HMM E-Value=0.12) 29 5.4
SB_24924| Best HMM Match : WHEP-TRS (HMM E-Value=1.1) 28 7.1
SB_53758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 9.4
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 9.4
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 9.4
SB_36628| Best HMM Match : Bac_Ubq_Cox (HMM E-Value=1.1) 28 9.4
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 28 9.4
SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 28 9.4
>SB_27799| Best HMM Match : ChaC (HMM E-Value=0)
Length = 216
Score = 116 bits (279), Expect = 2e-26
Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
WVFGYGSL W P F Y++S+ G+++GF R+FWQG+ HRG E+ G W
Sbjct: 24 WVFGYGSLIWKPDFTYERSVVGHIRGFERKFWQGSVWHRGNEE------------TGQVW 71
Query: 487 GKAFLVAAEN-SVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ V+ E+ AL L KRE LGGY+ + F+P + +ALLY A PEN
Sbjct: 72 GVAYKVSGEDIDTALGRLNKREIALGGYELHNLTFYPQD----QSLEPFNALLYAATPEN 127
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYL 753
+ G +A QI+ G SG NVEYL
Sbjct: 128 SLYFGKETPEKLALQIVSAHGVSGPNVEYL 157
>SB_24978| Best HMM Match : ChaC (HMM E-Value=0)
Length = 189
Score = 108 bits (259), Expect = 5e-24
Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
W+FGYGSL W F Y++ + GY+KG+ R+F+QG+ HRG PG+ W
Sbjct: 15 WIFGYGSLVWKVNFPYKKKVAGYIKGYVRKFYQGSCDHRGV---PGK---------STVW 62
Query: 487 GKAFLVAAENSVA-LPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G ++ V A++ + L YL RE GY FHP+ L ++ +LY+A EN
Sbjct: 63 GISYQVDAQDEPSVLRYLDIRE--KDGYTAGFTTFHPSGNL----EEQFQVMLYVATQEN 116
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYLL 756
+ +LG APLP+IA QI +G SG N EYLL
Sbjct: 117 EFYLGPAPLPEIAYQIAHSKGTSGKNSEYLL 147
>SB_29775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 PPNLHSLLVR*GSATLFSA-ATKNALPQVIPSLSSIRVATRPGLSS 429
PP++H +R SA A K+ + +V+P + +RVATR GL S
Sbjct: 263 PPSVHRCHIRKDSAHWCKARGAKSEVWRVVPQEAWVRVATRSGLGS 308
>SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1255
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 PPNLHSLLVR*GSATLFSA-ATKNALPQVIPSLSSIRVATRPGLSS 429
PP++H +R G A A K+ + +V P + +RVATR GL S
Sbjct: 799 PPSVHRCHIRKGGAQWCKARGAKSEVWRVAPQEAWVRVATRSGLGS 844
>SB_14134| Best HMM Match : Hormone_3 (HMM E-Value=2.3)
Length = 683
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 PPNLHSLLVR*GSATLFSA-ATKNALPQVIPSLSSIRVATRPGLSS 429
PP +H +R G A A K+ + +V P + +RVATR GL S
Sbjct: 453 PPGVHRCHIRKGGAQWRKARGAKSEVLRVAPQEAWVRVATRSGLGS 498
>SB_42721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 PPNLHSLLVR*GSATLFSA-ATKNALPQVIPSLSSIRVATRPGLSS 429
PP+++ L+R A A K+ + +V P + +RVATR GL S
Sbjct: 461 PPSVYRCLIRKSGAQWCKARGAKSEVWRVAPQEAWVRVATRSGLGS 506
>SB_35| Best HMM Match : zf-U1 (HMM E-Value=0.12)
Length = 366
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 109 KKFFSMYAR*NHLTRLFI---ILLSHFLFEFKCY 201
KK +S YA NHL RL+I + ++ E+ CY
Sbjct: 271 KKAYSQYASHNHLLRLYITEHVCYVGYISEYVCY 304
>SB_24924| Best HMM Match : WHEP-TRS (HMM E-Value=1.1)
Length = 1002
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 PPNLHSLLVR*GSATLFSA-ATKNALPQVIPSLSSIRVATRPGLSS 429
P +H +R G A A K+ + +V+P + +RV TR GL S
Sbjct: 545 PTGVHRCHIRKGGAQWCKARGAKSEVCRVVPQEAWVRVTTRSGLGS 590
>SB_53758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 444 TRLIFCSTMSGVPLPESP*ETFYI-TSQGLLVFEPWI 337
T + C + G PLPESP F + T + +++ E W+
Sbjct: 121 TTRLDCQVLFGYPLPESPSLGFGVFTLRVVIILEVWV 157
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 444 TRLIFCSTMSGVPLPESP*ETFYI-TSQGLLVFEPWI 337
T + C + G PLPESP F + T + +++ E W+
Sbjct: 194 TTSLDCQVLFGYPLPESPSLGFGVFTLRVVIILEVWV 230
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 257 TKRAVPNQKQNLTRNLSGYLVMVPS 331
T +A PN+ +TR LSGY ++PS
Sbjct: 306 TDKADPNKSTEITRILSGYKQILPS 330
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 257 TKRAVPNQKQNLTRNLSGYLVMVPS 331
T +A PN+ +TR LSGY ++PS
Sbjct: 158 TDKADPNKSTEITRILSGYKQILPS 182
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 257 TKRAVPNQKQNLTRNLSGYLVMVPS 331
T +A PN+ +TR LSGY ++PS
Sbjct: 306 TDKADPNKSTEITRILSGYKQILPS 330
>SB_36628| Best HMM Match : Bac_Ubq_Cox (HMM E-Value=1.1)
Length = 461
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 528 QCYAVFCGHQKRFTPSYSFLVLY*SGDATRLIFCSTMSG 412
QC+A F + FTP + +LY + L+ C+ M G
Sbjct: 132 QCFAFFGVYSLGFTPKHKVKILYVVVIGSLLLVCAMMFG 170
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 441 GSRRHSNRGQGRNNLG*SVFGGRRKQRSTALSHQKRMQIRWLQD 572
G R +RG GR G G R RST S + + RW D
Sbjct: 160 GRGRGGSRGPGRRGGGPVGRGRTRGNRSTPYSRPRELPDRWQHD 203
>SB_28433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 536
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 497 NALPQVIPSLSSIRVATRPGLSSVPR*VVFPCQNLL 390
++LP+V+ SL + + GLSS+P +FP + L
Sbjct: 180 SSLPEVLSSLPEVLSSLPEGLSSLPEGSLFPTRGSL 215
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 356 WYSNPGFQQREP*PNTQKGSLLDSVFDSELLVSFLNLSIFVYKHKQLL 213
W+S P F P P+ QK S D+EL LS H Q L
Sbjct: 1394 WFSGPQFLYENPTPSNQKPSSQLDPDDAELRKEVSVLSTSTTMHTQYL 1441
>SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 435
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 257 TKRAVPNQKQNLTRNLSGYLVMVPS 331
T +A PN+ +TR LSGY ++PS
Sbjct: 306 TDKADPNKSTEITRILSGYKQILPS 330
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,214,491
Number of Sequences: 59808
Number of extensions: 523869
Number of successful extensions: 1279
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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