BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1p14
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019625-1|AAH19625.1| 222|Homo sapiens ChaC, cation transport ... 165 1e-40
BC001847-1|AAH01847.1| 222|Homo sapiens ChaC, cation transport ... 165 1e-40
BC001683-1|AAH01683.1| 222|Homo sapiens ChaC, cation transport ... 165 1e-40
BC053896-1|AAH53896.1| 184|Homo sapiens ChaC, cation transport ... 148 2e-35
BC025376-1|AAH25376.1| 184|Homo sapiens ChaC, cation transport ... 148 2e-35
BC019239-1|AAH19239.1| 184|Homo sapiens ChaC, cation transport ... 148 2e-35
AC007883-2|AAY24351.1| 184|Homo sapiens unknown protein. 148 2e-35
BC017941-1|AAH17941.1| 184|Homo sapiens ChaC, cation transport ... 145 2e-34
AY702027-1|AAW23972.1| 177|Homo sapiens cation transport protei... 106 1e-22
BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor, argini... 30 7.8
AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein. 30 7.8
AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of white-apr... 30 7.8
AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white apr... 30 7.8
>BC019625-1|AAH19625.1| 222|Homo sapiens ChaC, cation transport
regulator homolog 1 (E. coli) protein.
Length = 222
Score = 165 bits (402), Expect = 1e-40
Identities = 84/151 (55%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
W+FGYGSL W P F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TW
Sbjct: 34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 93
Query: 487 GKAFLVAAEN-SVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ V E S AL YL RE LGGY T V F+P A K AL Y+A P+N
Sbjct: 94 GVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQ---DAPDQPLK-ALAYVATPQN 149
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYLL 756
+LG AP IA QIL CRG SG N+EYLL
Sbjct: 150 PGYLGPAPEEAIATQILACRGFSGHNLEYLL 180
>BC001847-1|AAH01847.1| 222|Homo sapiens ChaC, cation transport
regulator homolog 1 (E. coli) protein.
Length = 222
Score = 165 bits (402), Expect = 1e-40
Identities = 84/151 (55%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
W+FGYGSL W P F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TW
Sbjct: 34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 93
Query: 487 GKAFLVAAEN-SVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ V E S AL YL RE LGGY T V F+P A K AL Y+A P+N
Sbjct: 94 GVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQ---DAPDQPLK-ALAYVATPQN 149
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYLL 756
+LG AP IA QIL CRG SG N+EYLL
Sbjct: 150 PGYLGPAPEEAIATQILACRGFSGHNLEYLL 180
>BC001683-1|AAH01683.1| 222|Homo sapiens ChaC, cation transport
regulator homolog 1 (E. coli) protein.
Length = 222
Score = 165 bits (402), Expect = 1e-40
Identities = 84/151 (55%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
W+FGYGSL W P F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TW
Sbjct: 34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 93
Query: 487 GKAFLVAAEN-SVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ V E S AL YL RE LGGY T V F+P A K AL Y+A P+N
Sbjct: 94 GVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQ---DAPDQPLK-ALAYVATPQN 149
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYLL 756
+LG AP IA QIL CRG SG N+EYLL
Sbjct: 150 PGYLGPAPEEAIATQILACRGFSGHNLEYLL 180
>BC053896-1|AAH53896.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 148 bits (358), Expect = 2e-35
Identities = 76/150 (50%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
WVFGYGSL W F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61
Query: 487 GKAF-LVAAENSVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ L + YL RE GGY+T V F+P P T+ LLYI +N
Sbjct: 62 GVAYRLPVGKEEEVKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDN 115
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYL 753
+LG APL DIA+QI GPSG N EYL
Sbjct: 116 PDYLGPAPLEDIAEQIFNAAGPSGRNTEYL 145
>BC025376-1|AAH25376.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 148 bits (358), Expect = 2e-35
Identities = 76/150 (50%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
WVFGYGSL W F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61
Query: 487 GKAF-LVAAENSVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ L + YL RE GGY+T V F+P P T+ LLYI +N
Sbjct: 62 GVAYRLPVGKEEEVKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDN 115
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYL 753
+LG APL DIA+QI GPSG N EYL
Sbjct: 116 PDYLGPAPLEDIAEQIFNAAGPSGRNTEYL 145
>BC019239-1|AAH19239.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 148 bits (358), Expect = 2e-35
Identities = 76/150 (50%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
WVFGYGSL W F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61
Query: 487 GKAF-LVAAENSVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ L + YL RE GGY+T V F+P P T+ LLYI +N
Sbjct: 62 GVAYRLPVGKEEEVKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDN 115
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYL 753
+LG APL DIA+QI GPSG N EYL
Sbjct: 116 PDYLGPAPLEDIAEQIFNAAGPSGRNTEYL 145
>AC007883-2|AAY24351.1| 184|Homo sapiens unknown protein.
Length = 184
Score = 148 bits (358), Expect = 2e-35
Identities = 76/150 (50%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
WVFGYGSL W F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61
Query: 487 GKAF-LVAAENSVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ L + YL RE GGY+T V F+P P T+ LLYI +N
Sbjct: 62 GVAYRLPVGKEEEVKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDN 115
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYL 753
+LG APL DIA+QI GPSG N EYL
Sbjct: 116 PDYLGPAPLEDIAEQIFNAAGPSGRNTEYL 145
>BC017941-1|AAH17941.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 145 bits (351), Expect = 2e-34
Identities = 75/150 (50%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
WVFGYGSL W F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G W
Sbjct: 2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVW 61
Query: 487 GKAF-LVAAENSVALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPEN 663
G A+ L + YL E GGY+T V F+P P T+ LLYI +N
Sbjct: 62 GVAYRLPVGKEEEVKAYLDFGE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDN 115
Query: 664 KHWLGSAPLPDIAKQILECRGPSGSNVEYL 753
+LG APL DIA+QI GPSG N EYL
Sbjct: 116 PDYLGPAPLEDIAEQIFNAAGPSGRNTEYL 145
>AY702027-1|AAW23972.1| 177|Homo sapiens cation transport
protein-like protein protein.
Length = 177
Score = 106 bits (254), Expect = 1e-22
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = +1
Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
W+FGYGSL W P F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TW
Sbjct: 34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTW 93
Query: 487 GKAFLVAAENS 519
G A+ V E +
Sbjct: 94 GVAYQVQGEQN 104
Score = 41.1 bits (92), Expect = 0.004
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +1
Query: 658 ENKHWLGSAPLPDIAKQILECRGPSGSNVEYLL 756
+N +LG AP IA QIL CRG SG N+EYLL
Sbjct: 103 QNPGYLGPAPEEAIATQILACRGFSGHNLEYLL 135
>BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor,
arginine/serine-rich 16 protein.
Length = 659
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 402 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 530
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 400 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 443
>AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein.
Length = 594
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 402 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 530
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 415 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 458
>AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of
white-apricot homolog 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 402 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 530
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 400 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 443
>AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white
apricot homolog 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 402 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 530
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 400 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 443
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,426,640
Number of Sequences: 237096
Number of extensions: 2649725
Number of successful extensions: 8272
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8255
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -