Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1p14
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-8|AAF99914.2|  232|Caenorhabditis elegans Hypothetical ...   113   1e-25
U56965-8|AAB52663.1|  314|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.      29   3.6  
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ...    29   3.6  
Z82052-6|CAB04829.4|  327|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z68320-2|CAA92706.1|  502|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>AF067937-8|AAF99914.2|  232|Caenorhabditis elegans Hypothetical
           protein F22F7.7 protein.
          Length = 232

 Score =  113 bits (272), Expect = 1e-25
 Identities = 65/154 (42%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
 Frame = +1

Query: 307 WVFGYGSLCWNPGFEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITW 486
           W+FGYGSL WNPGF +  S   Y  G++RR +QGNT HRG E  PGRVATLIE+    T 
Sbjct: 51  WIFGYGSLIWNPGFTFSTSRKAYAIGWARRMYQGNTYHRGDEKLPGRVATLIEETNSYTN 110

Query: 487 GKAFLVAAENSV--ALPYLTKRECKLGGYKTCVVNFHPTPFLPAT--RADKKDALLYIAL 654
           G  F V  ++++  A+ YL +REC   GY   +V   P     A   R     AL  +A 
Sbjct: 111 GVVFRVDGKSAIATAVKYLEQRECD-NGYAFRMV---PVQIRSAAHRRPTVVMALTCVAD 166

Query: 655 PENKHWLGSAPLPDIAKQILECRGPSGSNVEYLL 756
            +N+ +LG   L  +A++I+  +G +G N EY+L
Sbjct: 167 QQNELYLGPDDLIKMAREIVTAKGCAGPNCEYVL 200


>U56965-8|AAB52663.1|  314|Caenorhabditis elegans Hypothetical
           protein C15H9.3 protein.
          Length = 314

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
 Frame = -1

Query: 750 ILNV*ARWTTAFQYLFR---YIWQRRRSKPM--FILWKGYVQQGILFIC 619
           +L+V   W+  F  +F    + W   R+KP+  F  +  YV QGI+F C
Sbjct: 135 MLSVCYLWSPEFPIIFHPEFWGWTEERNKPLVNFFFYLNYVVQGIVFFC 183


>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical
           protein C05C12.3 protein.
          Length = 1694

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 384 FLKEILAREHHSSWNRR*AGSRRHSNRGQGRNN-LG*SVFGGRRKQRSTALS 536
           + KE    ++    NR+  G R HSN   GRN+ +G S   GR +  S  +S
Sbjct: 621 YTKEEFKNQYFLFNNRKQFGKRVHSNSNGGRNDVIGPSGDAGRERMSSMQIS 672


>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
          Length = 1694

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 384 FLKEILAREHHSSWNRR*AGSRRHSNRGQGRNN-LG*SVFGGRRKQRSTALS 536
           + KE    ++    NR+  G R HSN   GRN+ +G S   GR +  S  +S
Sbjct: 621 YTKEEFKNQYFLFNNRKQFGKRVHSNSNGGRNDVIGPSGDAGRERMSSMQIS 672


>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
           homologous cationchannel protein.
          Length = 1681

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 384 FLKEILAREHHSSWNRR*AGSRRHSNRGQGRNN-LG*SVFGGRRKQRSTALS 536
           + KE    ++    NR+  G R HSN   GRN+ +G S   GR +  S  +S
Sbjct: 608 YTKEEFKNQYFLFNNRKQFGKRVHSNSNGGRNDVIGPSGDAGRERMSSMQIS 659


>Z82052-6|CAB04829.4|  327|Caenorhabditis elegans Hypothetical
           protein T25E12.11 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 116 FFQCMPVEII*LVFLSFCFHTFYSNLSVTISIIK 217
           FFQ   V +  L+ L FCF T  S++   I ++K
Sbjct: 233 FFQSFLVVLFKLIILPFCFETGNSSIEFFIMMLK 266


>Z68320-2|CAA92706.1|  502|Caenorhabditis elegans Hypothetical
           protein W07A12.7 protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 693 WQRRRSKPMFILWKGYVQQGILFICPS 613
           W R+  +P F  WK ++ + +L + PS
Sbjct: 165 WLRKADEPFFQHWKSFIARRLLRLAPS 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,232,479
Number of Sequences: 27780
Number of extensions: 415895
Number of successful extensions: 979
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)