Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1p11
         (636 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628...    29   4.1  
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167           27   9.4  
04_04_1525 - 34156813-34157058,34157245-34157435,34157885-341579...    27   9.4  
03_06_0668 + 35412258-35412527,35412635-35412728,35412853-354129...    27   9.4  
02_05_1231 - 35104832-35105002,35105104-35105167,35105267-351055...    27   9.4  

>04_01_0480 +
           6279576-6279755,6279863-6279988,6280074-6280151,
           6280847-6280972,6281244-6281345,6281416-6281490,
           6281852-6281975,6283005-6283107,6283546-6283617,
           6283662-6283788,6284125-6284180,6284438-6284453
          Length = 394

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 292 TKATKIRLVQTLVFPIFLYAVETW--TLRQVERKKNDALEMWCWRRMLGISWTELRTNIS 465
           T   KIR  +    PI  Y   T       VE  K+++L    W+R+      +LRT +S
Sbjct: 195 TNTGKIRRDRHYTDPIKNYVFHTKRSAALYVETGKHESL----WKRLELGGTNQLRTRLS 250

Query: 466 ILRELGIKQRLLA 504
            LR+L +K+ +L+
Sbjct: 251 KLRKLSLKEEILS 263


>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
          Length = 422

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 429 WYFMDRTSHQYLHSSRTRH*AASFGARAWTHTIIFW 536
           W+F+ R   Q L+ S        FG   W H + +W
Sbjct: 272 WHFLKRNGLQNLYESFCE--GTCFGGPVWNHILEYW 305


>04_04_1525 -
           34156813-34157058,34157245-34157435,34157885-34157956,
           34158351-34158419,34158531-34158639,34158872-34158987,
           34159117-34159210,34159289-34159460,34159545-34159669
          Length = 397

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -2

Query: 563 ESFPRRETCPKNDSMRPCTSAKRRCLMPSSRRMEILVRSSVHEIPSIRLQHHISRASFFF 384
           ESFP RET P ++   P  +A+   ++   + + I +  SV  I    L    + A FF 
Sbjct: 65  ESFPFRETAPPDE---PLVTAEESWVVKLEQSVNIFLTESVITILD-GLYRDRNYARFFV 120

Query: 383 LSTCRKV 363
           L T  +V
Sbjct: 121 LETIARV 127


>03_06_0668 +
           35412258-35412527,35412635-35412728,35412853-35412968,
           35414877-35414921,35415471-35415680
          Length = 244

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -2

Query: 563 ESFPRRETCPKNDSMRPCTSAKRRCLMPSSRRMEILVRSSVHEIPSIRLQHHISRASFFF 384
           ESFP RET P ++   P  +A+   ++   + + I +  SV  I    L    + A FF 
Sbjct: 56  ESFPFRETAPPDE---PLVTAEESWVVKLEQSVNIFLTESVITILD-GLYRDRNYARFFV 111

Query: 383 LSTCRKV 363
           L T  +V
Sbjct: 112 LETIARV 118


>02_05_1231 -
           35104832-35105002,35105104-35105167,35105267-35105557,
           35105755-35105999,35106410-35106489,35106890-35107006,
           35107150-35108002,35108081-35108161
          Length = 633

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -2

Query: 614 PRGLVPSTLP*TTRRSMESFPRRETCPKNDSMRPCT 507
           P G V S  P    +  E+FP R    K D  + CT
Sbjct: 69  PEGYVTSMKPVKAEQFDEAFPLRSVAVKKDDCKGCT 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,861,636
Number of Sequences: 37544
Number of extensions: 380949
Number of successful extensions: 1001
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)