Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1p11
         (636 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000039-1|AAH00039.1|  323|Homo sapiens family with sequence si...    30   6.0  
AL139339-1|CAH71483.1|  323|Homo sapiens family with sequence si...    30   6.0  
AK022195-1|BAB13983.1|  323|Homo sapiens protein ( Homo sapiens ...    30   6.0  

>BC000039-1|AAH00039.1|  323|Homo sapiens family with sequence
           similarity 26, member B protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +1

Query: 439 WTELRTNISILRELGIKQRLLALVHGRILSFFGHVSRRGNDSIERLVVQGKVEGTRPR 612
           W + R N   L +   +     L    +  FFG V+   +D  E L+    VEGT+PR
Sbjct: 220 WAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDD--EELIANFPVEGTQPR 275


>AL139339-1|CAH71483.1|  323|Homo sapiens family with sequence
           similarity 26, member B protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +1

Query: 439 WTELRTNISILRELGIKQRLLALVHGRILSFFGHVSRRGNDSIERLVVQGKVEGTRPR 612
           W + R N   L +   +     L    +  FFG V+   +D  E L+    VEGT+PR
Sbjct: 220 WAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDD--EELIANFPVEGTQPR 275


>AK022195-1|BAB13983.1|  323|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12133 fis, clone MAMMA1000278. ).
          Length = 323

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +1

Query: 439 WTELRTNISILRELGIKQRLLALVHGRILSFFGHVSRRGNDSIERLVVQGKVEGTRPR 612
           W + R N   L +   +     L    +  FFG V+   +D  E L+    VEGT+PR
Sbjct: 220 WAQYRANEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDD--EELIANFPVEGTQPR 275


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,549,912
Number of Sequences: 237096
Number of extensions: 2091974
Number of successful extensions: 8362
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8362
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)