Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1p06
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0597 + 5363049-5363429,5363559-5363715,5364390-5364757           50   2e-06

>05_01_0597 + 5363049-5363429,5363559-5363715,5364390-5364757
          Length = 301

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
 Frame = +2

Query: 284 LMITGVLWGCTNPFIRQGT----RGLRDIK--SDTLVGQVRAEIWFLLSNWKYVVPWLVN 445
           ++  G++WG TN  +R+G       LR +   S ++ G +R     LL+ W+Y  P+ VN
Sbjct: 10  MVAVGLVWGTTNALMRRGALVWDHRLRSLPATSSSVTGVLRRWAELLLT-WQYSAPFAVN 68

Query: 446 QAGSLVYLAAVQRAPLSVAVPVAS 517
            A S  + + +  AP+SVAVPV +
Sbjct: 69  LAASAAFFSLLGAAPISVAVPVTN 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,856,149
Number of Sequences: 37544
Number of extensions: 271508
Number of successful extensions: 619
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)