Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1p05
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 33 0.19
05_03_0479 + 14529783-14530613 33 0.33
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 31 1.0
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 30 1.7
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 30 2.3
11_06_0397 + 23110842-23111164,23111714-23111909,23114120-231144... 29 3.1
04_03_0661 - 18468244-18469580,18469610-18469619 29 3.1
06_01_0974 + 7541771-7542553,7542666-7542795,7543098-7543645,754... 29 5.3
05_05_0191 + 23127068-23127331,23127514-23127546 29 5.3
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 28 7.1
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 28 9.3
06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422 28 9.3
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 28 9.3
03_06_0445 - 33982018-33982965,33984308-33984463 28 9.3
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 9.3
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 679 LQPHPNNVRHLTENGWSANECRTKGEK 759
+Q HPN +RH+ E+G NE RT G+K
Sbjct: 531 MQVHPNGIRHIREDG-RVNEWRTPGKK 556
>05_03_0479 + 14529783-14530613
Length = 276
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 189 THYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHSDYRSNST 368
T++ SDSD+ S K+K ++P + + S T+ + V D TP P + R+N +
Sbjct: 146 TNFPSDSDT-PSAKAKQMKLHPRRHTTPDKTPSSSTAAAAKASVPDPTPAPPEEDRANDS 204
Query: 369 PF 374
F
Sbjct: 205 SF 206
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 618 RKEQEKREKARLEKQKQHTIPATTPEQREASYR-KWLERKRMQNERRKA 761
R + EKR++ +KQ++ +QRE + K LE+++ + E RKA
Sbjct: 637 RSQDEKRKELEKQKQEEERKELDRQKQREEERKAKELEKQKQREEERKA 685
>09_01_0076 +
1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 594 EAFRQWLARKEQE---KREKARLEKQKQHTIPATTPEQREASYRKWLERKRMQNERRK 758
E FRQW A +E+E R++ R + ++H + A Q+ RK E M +R K
Sbjct: 647 EQFRQWKATREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRK-TEEAAMATKRLK 703
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 591 QEAFRQWLARKEQEKREKARLEKQKQHTIPATTPEQREASYRKWLERKRMQNERRKA 761
Q A R + R +QE RE+A E +++ A +R AS K ER+R ER A
Sbjct: 567 QRAQRAAVQRAQQEARERAAAEAKEKAARIAAEARERAASEAK--ERERAAAERAAA 621
>11_06_0397 +
23110842-23111164,23111714-23111909,23114120-23114410,
23116292-23116297
Length = 271
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 654 EKQKQHTIPATTPEQREASYRKWLERK 734
+KQK H I T ++ A YR+W+ER+
Sbjct: 180 DKQKNHDIRLKTLLEQFARYREWIERE 206
>04_03_0661 - 18468244-18469580,18469610-18469619
Length = 448
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 618 RKEQEKREKARLEKQKQHTIPATTPEQREASYRKWLERKRMQNERRKA 761
RKE+EK EK R +K+ A ++ EA+ ERKR + E ++A
Sbjct: 85 RKEEEKAEKQR---RKEAKYLAKKMQEEEAARAAEEERKRKEEEAKRA 129
>06_01_0974 +
7541771-7542553,7542666-7542795,7543098-7543645,
7544482-7544864,7546670-7546766
Length = 646
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 219 ASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHSDYRSNST 368
A R K + + ++ IEA + + C DV P P S RS+ST
Sbjct: 256 AKRFDKVKIVRESMN-RMIEAWKEIPDMDEEVCSSDVPPSPQSQTRSSST 304
>05_05_0191 + 23127068-23127331,23127514-23127546
Length = 98
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 618 RKEQEKREKA--RLEKQKQHTIPATTPEQ 698
+ E+EKR++ +LEK + T PATTP Q
Sbjct: 61 KSEEEKRKRVHRKLEKLHRPTSPATTPPQ 89
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 519 EKCQAHL-HDKYDRYEVCLHLYKLECDLPVMYKIFFSDLLKIH 394
EK + L HD Y + CLH+Y E K +D+L+ H
Sbjct: 474 EKVKEKLEHDAYQEFLKCLHIYSQEIITRSELKNLVNDILQQH 516
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 621 KEQEKREKARLEKQKQHTIPATTPEQREASYRKWLERKRMQNERRK 758
+E E+R + +E++K+ E R ++W E+KR++ E K
Sbjct: 13 EESERRRQKMIEEEKKRLDEEM--ELRRRRVKEWQEQKRLEEEEAK 56
>06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422
Length = 241
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +3
Query: 318 VDDVTPHPHSDYR--SNSTPFLSGR 386
+D+VT H HS Y+ +N TP + G+
Sbjct: 36 IDEVTTHTHSPYKTHANPTPVIDGQ 60
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 207 SDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDV 329
SD V S+ T A Y E I AT VTS + G+ +DD+
Sbjct: 129 SDLVRSKHIDTN--EAASYAESIGATLFVTSAKAGTGIDDI 167
>03_06_0445 - 33982018-33982965,33984308-33984463
Length = 367
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 282 THSVTSLQTGSCVDDVTPHPHSDYRSNSTPFL 377
T + S Q G + +T HPHSD +S +T L
Sbjct: 45 TDVLVSTQVGKRLRYLTKHPHSDIQSMATDLL 76
>01_01_0128 -
1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 615 ARKEQEKREKARLEKQKQHTIPATTPEQREASYRKWLERKRMQ 743
ARK++E+R++ E++ + A QRE + E++RM+
Sbjct: 854 ARKQEERRKREETERKAKLDAIAAKQLQRERELEEKKEKQRME 896
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,572,645
Number of Sequences: 37544
Number of extensions: 383025
Number of successful extensions: 1164
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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