Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1p03
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99714-5|CAB62929.1|  339|Homo sapiens protein ( Human DNA seque...   105   2e-22
BC066962-1|AAH66962.1|  332|Homo sapiens similar to SRR1-like pr...   105   2e-22
U63541-1|AAF77225.1|  342|Homo sapiens hemochromatosis protein p...    35   0.28 
AK126089-1|BAC86432.1|  968|Homo sapiens protein ( Homo sapiens ...    31   4.5  

>Z99714-5|CAB62929.1|  339|Homo sapiens protein ( Human DNA sequence
           from clone CTB-1048E9 on chromosome 22. ).
          Length = 339

 Score =  105 bits (252), Expect = 2e-22
 Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
 Frame = +3

Query: 261 VEIVCFGLGRIAECNISRYQLALLLSLRDIFNIKK--VFVHDPIFYKSECTVLQXXXXXX 434
           ++ VC+G+G  A C ++R QL  LL L +   I +   +V+DP+F + E  VL       
Sbjct: 139 LKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTV 198

Query: 435 XXXXXXXXYVISDSGVTLVYLPHCPKQLTNNFLWSNWGVN-LRNCVLICNSFNSLIENQP 611
                     I     T+ Y+ HC   L NN LWSNW V+ L   V+I NSF  L E   
Sbjct: 199 LSENEEGKRSIRGEP-TIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLL 257

Query: 612 SRVLKEIVPFIKNIFPYTSEIYLENNFQYSDIFNDTSLHYFPM 740
           +R+L++  P+I  I     E+      QY DIFNDTS+H+FP+
Sbjct: 258 ARILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPV 300


>BC066962-1|AAH66962.1|  332|Homo sapiens similar to SRR1-like
           protein protein.
          Length = 332

 Score =  105 bits (252), Expect = 2e-22
 Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
 Frame = +3

Query: 261 VEIVCFGLGRIAECNISRYQLALLLSLRDIFNIKK--VFVHDPIFYKSECTVLQXXXXXX 434
           ++ VC+G+G  A C ++R QL  LL L +   I +   +V+DP+F + E  VL       
Sbjct: 132 LKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTV 191

Query: 435 XXXXXXXXYVISDSGVTLVYLPHCPKQLTNNFLWSNWGVN-LRNCVLICNSFNSLIENQP 611
                     I     T+ Y+ HC   L NN LWSNW V+ L   V+I NSF  L E   
Sbjct: 192 LSENEEGKRSIRGEP-TIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLL 250

Query: 612 SRVLKEIVPFIKNIFPYTSEIYLENNFQYSDIFNDTSLHYFPM 740
           +R+L++  P+I  I     E+      QY DIFNDTS+H+FP+
Sbjct: 251 ARILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPV 293


>U63541-1|AAF77225.1|  342|Homo sapiens hemochromatosis protein
           protein.
          Length = 342

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 639 FIKNIFPYTSEIYLENNFQYSDIFNDTSLHYFPM 740
           F   I     E+      QY DIFNDTS+H+FP+
Sbjct: 274 FSAQILKGLEELEFPQTSQYMDIFNDTSVHWFPV 307


>AK126089-1|BAC86432.1|  968|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44101 fis, clone TESTI4043947. ).
          Length = 968

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +3

Query: 6   KILKKIMSRSVIDNDGFTLVKSKRSSKNK-QTKIPEKSFSFTNSDIEINISKTVRKINTA 182
           K LK   S++ I   G + + S   +KN   TK+P         DI INI +T+ K    
Sbjct: 202 KTLKDSRSKTAI---GLSHIMSAGDAKNLLDTKLPTSELKIYAKDIIINILETIVKEFGK 258

Query: 183 VEELKISTYFENVA--KSVSTVLQ 248
           V++ K     + +A  K V+TVLQ
Sbjct: 259 VKQTKALPSDQIIAAGKIVNTVLQ 282


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,716,958
Number of Sequences: 237096
Number of extensions: 2059285
Number of successful extensions: 7039
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7035
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)