Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1o24
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p pro...   251   6e-67
AF186594-4|AAG16726.2|  531|Drosophila melanogaster 26S proteaso...   251   6e-67
AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteaso...   251   6e-67
AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-P...   251   6e-67
AF312231-1|AAG33625.1|  946|Drosophila melanogaster proteosome s...    96   5e-20
AJ238857-1|CAB42967.1|  975|Drosophila melanogaster CAS protein ...    29   4.5  
AF132562-1|AAD27861.1|  975|Drosophila melanogaster LD14270p pro...    29   4.5  
AE014134-2793|AAF53575.1|  975|Drosophila melanogaster CG13281-P...    29   4.5  
AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-P...    29   6.0  
AE014134-2068|AAF53099.1|  570|Drosophila melanogaster CG6488-PA...    29   6.0  
BT001708-1|AAN71463.1|  656|Drosophila melanogaster RE66405p pro...    29   7.9  
AY058614-1|AAL13843.1|  676|Drosophila melanogaster LD30829p pro...    29   7.9  
AJ781055-1|CAG70683.1|  309|Drosophila melanogaster Pp1Y2 protei...    29   7.9  
AF427494-1|AAL25118.1|  309|Drosophila melanogaster protein phos...    29   7.9  
AE013599-2227|AAF58035.2|  746|Drosophila melanogaster CG15707-P...    29   7.9  

>BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p
           protein.
          Length = 1020

 Score =  251 bits (615), Expect = 6e-67
 Identities = 119/183 (65%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
 Frame = +2

Query: 143 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 322
           M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP           LHED+ F +++L
Sbjct: 1   MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60

Query: 323 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 499
           A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY  +R     + 
Sbjct: 61  AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120

Query: 500 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 679
             A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180

Query: 680 FTV 688
           + V
Sbjct: 181 YNV 183


>AF186594-4|AAG16726.2|  531|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p110 protein.
          Length = 531

 Score =  251 bits (615), Expect = 6e-67
 Identities = 119/183 (65%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
 Frame = +2

Query: 143 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 322
           M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP           LHED+ F +++L
Sbjct: 1   MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60

Query: 323 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 499
           A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY  +R     + 
Sbjct: 61  AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120

Query: 500 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 679
             A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180

Query: 680 FTV 688
           + V
Sbjct: 181 YNV 183


>AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p110 protein.
          Length = 1020

 Score =  251 bits (615), Expect = 6e-67
 Identities = 119/183 (65%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
 Frame = +2

Query: 143 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 322
           M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP           LHED+ F +++L
Sbjct: 1   MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60

Query: 323 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 499
           A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY  +R     + 
Sbjct: 61  AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120

Query: 500 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 679
             A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180

Query: 680 FTV 688
           + V
Sbjct: 181 YNV 183


>AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-PA
           protein.
          Length = 1020

 Score =  251 bits (615), Expect = 6e-67
 Identities = 119/183 (65%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
 Frame = +2

Query: 143 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWPXXXXXXXXXXXLHEDKIFSQHQL 322
           M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP           LHED+ F +++L
Sbjct: 1   MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKL 60

Query: 323 AALVASKVYYHLGAFEDSLTYALGAGDLFDVNARNEYVDTTIAKAIDFYTQKRKALFVD- 499
           A +VASKV+YHLG+FED+LTYALGAGDLFDVNARNEY +T IAK IDFY  +R     + 
Sbjct: 61  AGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENP 120

Query: 500 SSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 679
             A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++IMKSDD+ GML YA
Sbjct: 121 KEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYA 180

Query: 680 FTV 688
           + V
Sbjct: 181 YNV 183


>AF312231-1|AAG33625.1|  946|Drosophila melanogaster proteosome
           subunit RPN2 protein.
          Length = 946

 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 43/76 (56%), Positives = 58/76 (76%)
 Frame = +2

Query: 461 DFYTQKRKALFVDSSAELIDHRLEDIVNRMFQRCLEDGQYRQALGLALETRRMDIFEESI 640
           +F+ +  + +     A ++D RLE IVNRM QRCL+D Q+RQALG+ALETRRMD F+++I
Sbjct: 34  EFWPEISEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAI 93

Query: 641 MKSDDIPGMLQYAFTV 688
           MKSDD+ GML YA+ V
Sbjct: 94  MKSDDVRGMLAYAYNV 109



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +2

Query: 143 MNITSAAGIISLLDEPMSEVKEFALKRLDNIVDEFWP 253
           M++TSAAGIISLLDEPM ++K FALK+LDNIVDEFWP
Sbjct: 1   MSLTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWP 37


>AJ238857-1|CAB42967.1|  975|Drosophila melanogaster CAS protein
           protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 253 WPKLIDDVVQPLQSEFFNFRHGLIEQGNNPRGRRDVHFSSLFYLTYLKWV 104
           WP+LID++V+   S  FN  +G+++  ++   R    F S      +K+V
Sbjct: 130 WPQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFV 179


>AF132562-1|AAD27861.1|  975|Drosophila melanogaster LD14270p
           protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 253 WPKLIDDVVQPLQSEFFNFRHGLIEQGNNPRGRRDVHFSSLFYLTYLKWV 104
           WP+LID++V+   S  FN  +G+++  ++   R    F S      +K+V
Sbjct: 130 WPQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFV 179


>AE014134-2793|AAF53575.1|  975|Drosophila melanogaster CG13281-PA
           protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 253 WPKLIDDVVQPLQSEFFNFRHGLIEQGNNPRGRRDVHFSSLFYLTYLKWV 104
           WP+LID++V+   S  FN  +G+++  ++   R    F S      +K+V
Sbjct: 130 WPQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFV 179


>AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-PA
            protein.
          Length = 1736

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 539  VNRMFQRCLEDGQYRQALGLALETRRMDIFEESIMKSDDIPGMLQYA 679
            +N++ QRC E+    Q  GL L  RR+ I E  +++      ML YA
Sbjct: 1510 LNQLVQRCSEEHSTHQEAGLLLGLRRL-IGESKMLERKHWLPMLNYA 1555


>AE014134-2068|AAF53099.1|  570|Drosophila melanogaster CG6488-PA
           protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
 Frame = +2

Query: 377 LTYALGAGDLFDVNARNEY-VDTTIAKAIDFYTQKRKALFVDSSAELIDHR--------- 526
           +T A  +  +F    R+E  +DT ++K  D   Q  +  F+  SAEL + R         
Sbjct: 78  ITTAENSRSIFSEFLRSEQQLDTLVSKLPDLSVQCER--FLQDSAELNEQRRLNSITLQK 135

Query: 527 ----LEDI-VNRMFQRCLEDGQYRQALGLALETRRM 619
               LE + + ++ +RC+ +G+Y +AL LA    R+
Sbjct: 136 NAQLLEVLELPQLMERCIREGRYEEALELAAYATRL 171


>BT001708-1|AAN71463.1|  656|Drosophila melanogaster RE66405p
           protein.
          Length = 656

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 406 FRREREKRICRHYDRK 453
           FR + E+RICRHYD K
Sbjct: 508 FRPKDEQRICRHYDPK 523


>AY058614-1|AAL13843.1|  676|Drosophila melanogaster LD30829p
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 406 FRREREKRICRHYDRK 453
           FR + E+RICRHYD K
Sbjct: 438 FRPKDEQRICRHYDPK 453


>AJ781055-1|CAG70683.1|  309|Drosophila melanogaster Pp1Y2 protein
           protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/37 (27%), Positives = 24/37 (64%)
 Frame = -1

Query: 490 ESLSLLSVKVDRFCDRSVDIFVSRVHVEKISSPERVC 380
           + L+L    +   C+RS ++F+S+  + ++S+P ++C
Sbjct: 24  KQLNLTETDIRLLCNRSREVFMSQPMLLELSAPVKIC 60


>AF427494-1|AAL25118.1|  309|Drosophila melanogaster protein
           phosphatase 1 catalyticsubunit protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/37 (27%), Positives = 24/37 (64%)
 Frame = -1

Query: 490 ESLSLLSVKVDRFCDRSVDIFVSRVHVEKISSPERVC 380
           + L+L    +   C+RS ++F+S+  + ++S+P ++C
Sbjct: 24  KQLNLTETDIRLLCNRSREVFMSQPMLLELSAPVKIC 60


>AE013599-2227|AAF58035.2|  746|Drosophila melanogaster CG15707-PA
           protein.
          Length = 746

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 406 FRREREKRICRHYDRK 453
           FR + E+RICRHYD K
Sbjct: 508 FRPKDEQRICRHYDPK 523


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,811,439
Number of Sequences: 53049
Number of extensions: 545212
Number of successful extensions: 1537
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)