Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1o18
(556 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z31560-1|CAA83435.1| 321|Homo sapiens sox-2 protein. 31 2.1
L07335-1|AAA35997.1| 327|Homo sapiens protein ( Homo sapiens (c... 31 2.1
BC150530-1|AAI50531.1| 329|Homo sapiens family with sequence si... 31 2.1
BC127898-1|AAI27899.2| 329|Homo sapiens family with sequence si... 31 2.1
BC013923-1|AAH13923.1| 317|Homo sapiens SRY (sex determining re... 31 2.1
AL160171-1|CAI12928.1| 329|Homo sapiens novel protein protein. 31 2.1
Y13436-1|CAA73847.1| 387|Homo sapiens Sry-related Box 1 protein... 31 2.7
AL138691-1|CAH72340.1| 391|Homo sapiens SRY (sex determining re... 31 2.7
X65666-1|CAA46617.1| 54|Homo sapiens SOX-10 protein. 31 3.6
BC106730-1|AAI06731.1| 240|Homo sapiens SRY (sex determining re... 31 3.6
BC106729-1|AAI06730.1| 240|Homo sapiens SRY (sex determining re... 31 3.6
AL137061-1|CAI14398.1| 276|Homo sapiens SRY (sex determining re... 31 3.6
AJ006230-1|CAB43111.1| 240|Homo sapiens Sox-14 protein protein. 31 3.6
AF193436-1|AAF76294.1| 240|Homo sapiens HMG box transcription f... 31 3.6
AF107044-1|AAC95381.1| 276|Homo sapiens DNA-binding protein SOX... 31 3.6
AF107043-1|AAC95380.1| 240|Homo sapiens DNA-binding protein SOX... 31 3.6
AF032451-1|AAC94971.1| 54|Homo sapiens SOX-14 protein protein. 31 3.6
AF032453-1|AAC94973.1| 54|Homo sapiens SOX-28 protein protein. 30 4.7
X65665-1|CAA46616.1| 54|Homo sapiens SOX-9 protein. 29 8.3
BC129934-1|AAI29935.1| 1652|Homo sapiens PB1 protein protein. 29 8.3
AY281068-1|AAP34197.1| 1689|Homo sapiens polybromo-1D protein. 29 8.3
>Z31560-1|CAA83435.1| 321|Homo sapiens sox-2 protein.
Length = 321
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 62 KMAQENPKMH-NSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 108
>L07335-1|AAA35997.1| 327|Homo sapiens protein ( Homo sapiens
(clone 6AR33) HMG box mRNA, 3' end cds. ).
Length = 327
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 68 KMAQENPKMH-NSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 114
>BC150530-1|AAI50531.1| 329|Homo sapiens family with sequence
similarity 102, member B protein.
Length = 329
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 390 IAEPNMDLN*NPDLASTTLARCPYRKS*SLNVFKRI 497
IAEPN+D D AS L+RCP ++ + KR+
Sbjct: 230 IAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRV 265
>BC127898-1|AAI27899.2| 329|Homo sapiens family with sequence
similarity 102, member B protein.
Length = 329
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 390 IAEPNMDLN*NPDLASTTLARCPYRKS*SLNVFKRI 497
IAEPN+D D AS L+RCP ++ + KR+
Sbjct: 230 IAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRV 265
>BC013923-1|AAH13923.1| 317|Homo sapiens SRY (sex determining
region Y)-box 2 protein.
Length = 317
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 58 KMAQENPKMH-NSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 104
>AL160171-1|CAI12928.1| 329|Homo sapiens novel protein protein.
Length = 329
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 390 IAEPNMDLN*NPDLASTTLARCPYRKS*SLNVFKRI 497
IAEPN+D D AS L+RCP ++ + KR+
Sbjct: 230 IAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRV 265
>Y13436-1|CAA73847.1| 387|Homo sapiens Sry-related Box 1 protein
protein.
Length = 387
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ + EK + + KR +LH E
Sbjct: 68 KMAQENPKMH-NSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKE 114
>AL138691-1|CAH72340.1| 391|Homo sapiens SRY (sex determining
region Y)-box 1 protein.
Length = 391
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ + EK + + KR +LH E
Sbjct: 68 KMAQENPKMH-NSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKE 114
>X65666-1|CAA46617.1| 54|Homo sapiens SOX-10 protein.
Length = 54
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK + + KR ++H E
Sbjct: 7 KMAQENPKMH-NSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 53
>BC106730-1|AAI06731.1| 240|Homo sapiens SRY (sex determining
region Y)-box 14 protein.
Length = 240
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 71
>BC106729-1|AAI06730.1| 240|Homo sapiens SRY (sex determining
region Y)-box 14 protein.
Length = 240
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 71
>AL137061-1|CAI14398.1| 276|Homo sapiens SRY (sex determining
region Y)-box 21 protein.
Length = 276
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK + + KR ++H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 71
>AJ006230-1|CAB43111.1| 240|Homo sapiens Sox-14 protein protein.
Length = 240
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 71
>AF193436-1|AAF76294.1| 240|Homo sapiens HMG box transcription
factor protein.
Length = 240
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 71
>AF107044-1|AAC95381.1| 276|Homo sapiens DNA-binding protein SOX21
protein.
Length = 276
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK + + KR ++H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 71
>AF107043-1|AAC95380.1| 240|Homo sapiens DNA-binding protein SOX14
protein.
Length = 240
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 25 KMAQENPKMH-NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 71
>AF032451-1|AAC94971.1| 54|Homo sapiens SOX-14 protein protein.
Length = 54
Score = 30.7 bits (66), Expect = 3.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 256
++ ++ P H N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 7 KMAQENPKMH-NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 53
>AF032453-1|AAC94973.1| 54|Homo sapiens SOX-28 protein protein.
Length = 54
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDN 253
++ ++ P H N +I+KR+G+E++ L EK Y + KR + H N
Sbjct: 7 KVAQENPKMH-NSKISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMN 52
>X65665-1|CAA46616.1| 54|Homo sapiens SOX-9 protein.
Length = 54
Score = 29.5 bits (63), Expect = 8.3
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 113 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLH 247
++ ++ P H N EI+KR+G+E++ L EK + + KR ++H
Sbjct: 7 KMAQENPKMH-NSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVH 50
>BC129934-1|AAI29935.1| 1652|Homo sapiens PB1 protein protein.
Length = 1652
Score = 29.5 bits (63), Expect = 8.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 110 AEIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEE 220
A IK + P D+ E+++ +G+E+R L T +K YEE
Sbjct: 1410 AVIKAQHP-DYSFGELSRLVGTEWRNLETAKKAEYEE 1445
>AY281068-1|AAP34197.1| 1689|Homo sapiens polybromo-1D protein.
Length = 1689
Score = 29.5 bits (63), Expect = 8.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 110 AEIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEE 220
A IK + P D+ E+++ +G+E+R L T +K YEE
Sbjct: 1395 AVIKAQHP-DYSFGELSRLVGTEWRNLETAKKAEYEE 1430
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,051,783
Number of Sequences: 237096
Number of extensions: 1465420
Number of successful extensions: 3325
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3325
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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